RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 ZNF281Q9Y2X9 895 aa12.97□□□□□ -0.33
TSPAN4-201ENST00000346501 FBN1P35555 2871 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 DNHD1Q96M86 4753 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 TMEM89A2RUT3 159 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 GNAO1P09471 354 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 BCL3P20749 454 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 UBE2E1P51965 193 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 ACSM1Q08AH1 577 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 KISS1Q15726 138 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 TUSC1Q2TAM9 212 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 C16orf87Q6PH81 154 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 Q6YL49 198 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 AHSA2Q719I0 299 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 SATL1Q86VE3 508 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 OR8H2Q8N162 312 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 C3orf56Q8N813 242 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 OR4M1Q8NGD0 313 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 OR5D18Q8NGL1 313 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 THRSPQ92748 146 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 TFAP2CQ92754 450 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 MYDGFQ969H8 173 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 TMEM106AQ96A25 262 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 PRDM13Q9H4Q3 707 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 UNKLQ9H9P5 680 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 EXOSC4Q9NPD3 245 aaKnown RBP12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 C19orf12Q9NSK7 152 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 POMT1Q9Y6A1 747 aa12.96□□□□□ -0.33
TSPAN4-201ENST00000346501 hADV38S2A0JD32 116 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 NPFFO15130 113 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 OGG1O15527 345 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 ANGPTL7O43827 346 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 SNU13P55769 128 aaKnown RBP12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 LGALS4P56470 323 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 ERVFRD-1P60508 538 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 MEF2CQ06413 473 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF146Q15072 292 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 GRK1Q15835 563 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 SPACA5Q96QH8 159 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 HMG20AQ9NP66 347 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 PCDHB16Q9NRJ7 776 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 RBFOX1Q9NWB1 397 aaKnown RBP12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 NKX1-2Q9UD57 310 aaPredicted RBP12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 PSORS1C1Q9UIG5 152 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 GSTK1Q9Y2Q3 226 aa12.95□□□□□ -0.34
TSPAN4-201ENST00000346501 MDFIC2A0A1B0GVS7 189 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 MEIOCA2RUB1 952 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 MGST3O14880 152 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 KDM4BO94953 1096 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 HKR1P10072 659 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF44P15621 663 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 NPBWR2P48146 333 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 HSPA13P48723 471 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 WNT4P56705 351 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 EDDM3AQ14507 147 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 YIF1BQ5BJH7 314 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 TMEM200BQ69YZ2 307 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 Q8N7P7 452 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 GHSRQ92847 366 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 FAM192AQ9GZU8 254 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 TMEM138Q9NPI0 162 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 TNFRSF19Q9NS68 423 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 CLEC2DQ9UHP7 191 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 TPRKBQ9Y3C4 175 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 STAB1Q9NY15 2570 aa12.94□□□□□ -0.34
TSPAN4-201ENST00000346501 A0A0U1RQK1 487 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 A0A1W2PRD5 423 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 A0A1W2PRF3 423 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 A0A1W2PRM7 423 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 F8VVB4 439 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 F8VWA3 439 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 RNASEK-C17orf49H0YIS7 233 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 MELTFP08582 738 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 DUSP1P28562 367 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 MTNR1BP49286 362 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 COMPP49747 757 aaPredicted RBP12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 SCN1BQ07699 218 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 RSU1Q15404 277 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 Q499Y3 187 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 MIDNQ504T8 468 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 TRAPPC6BQ86SZ2 158 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 CHST4Q8NCG5 386 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 FBLIM1Q8WUP2 373 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 TNFAIP8L1Q8WVP5 186 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 MND1Q9BWT6 205 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 TAS2R4Q9NYW5 299 aa12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 SOX21Q9Y651 276 aaPredicted RBP12.93□□□□□ -0.34
TSPAN4-201ENST00000346501 PTGES3LE9PB15 166 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 SIRPB1O00241 398 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF737O75373 536 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 RBP4P02753 201 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 CSTBP04080 98 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 ALDOBP05062 364 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 ZNF728P0DKX0 622 aa12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 MAPK3P27361 379 aaPredicted RBP12.92□□□□□ -0.34
TSPAN4-201ENST00000346501 BDKRB2P30411 391 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms