RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ALG1L2C9J202 215 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 H3BMH7 237 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 CHST1O43916 411 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 CNIH1O95406 144 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 KHDC3LQ587J8 217 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 OR10V1Q8NGI7 309 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 STARD4Q96DR4 205 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 SLC2A9Q9NRM0 540 aa15.49■□□□□ 0.07
SPAST-202ENST00000345662 HLA-DRB5Q30154 266 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 PQLC2LA1A4F0 135 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 DDTP30046 118 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 AGFG1P52594 562 aaKnown RBP15.48■□□□□ 0.07
SPAST-202ENST00000345662 ZMIZ1Q9ULJ6 1067 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 ICAM5Q9UMF0 924 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 DMRT1Q9Y5R6 373 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 DSPPQ9NZW4 1301 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 SYNGR2O43760 224 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 SOX15O60248 233 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 CDS2O95674 445 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 GAPDHP04406 335 aaKnown RBP15.48■□□□□ 0.07
SPAST-202ENST00000345662 SPCS3P61009 180 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 TBC1D26Q86UD7 250 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 WDR13Q9H1Z4 485 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 SIPA1L3O60292 1781 aaPredicted RBP15.48■□□□□ 0.07
SPAST-202ENST00000345662 TMEM30CPA0ZSE6 113 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 ZGLP1P0C6A0 271 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 PARM1Q6UWI2 310 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 RAB24Q969Q5 203 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 MCHR2Q969V1 340 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 ZNF355PQ9NSJ1 428 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 KIAA1456Q9P272 454 aa15.48■□□□□ 0.07
SPAST-202ENST00000345662 C11orf94C9JXX5 98 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 BMPR1BO00238 502 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 TCF21O43680 179 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 RHOBP62745 196 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 NHLH1Q02575 133 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 NHLH2Q02577 135 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 COL5A1-AS1Q5SY13 56 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 ZNF385CQ66K41 422 aaPredicted RBP15.47■□□□□ 0.07
SPAST-202ENST00000345662 OIT3Q8WWZ8 545 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 PTX4Q96A99 478 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 PAM16Q9Y3D7 125 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 ASCC3Q8N3C0 2202 aaKnown RBP15.47■□□□□ 0.07
SPAST-202ENST00000345662 SHISA8B8ZZ34 492 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 KCNAB3O43448 404 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 OR8B12Q8NGG6 310 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 ELSPBP1Q96BH3 223 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 KLK13Q9UKR3 277 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 HSF4Q9ULV5 492 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 VSIG8P0DPA2 414 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 CEACAM6P40199 344 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 SF3B6Q9Y3B4 125 aaKnown RBP15.47■□□□□ 0.07
SPAST-202ENST00000345662 CHRNB4P30926 498 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 C11orf42Q8N5U0 333 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 POM121L2Q96KW2 1035 aa15.47■□□□□ 0.07
SPAST-202ENST00000345662 ATP6V0CP27449 155 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 NANOS3P60323 173 aaKnown RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 RPS4XP62701 263 aaKnown RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 GNG3P63215 75 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 GGTLC2Q14390 218 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 DHRS7BQ6IAN0 325 aaPredicted RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 ATG4DQ86TL0 474 aaPredicted RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 FAM219AQ8IW50 185 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 THOC3Q96J01 351 aaKnown RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 RCC2Q9P258 522 aaKnown RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 STARD10Q9Y365 291 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 BTAF1O14981 1849 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 SLX4Q8IY92 1834 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 LIMS1P48059 325 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 MLF2Q15773 248 aaPredicted RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 BTNL3Q6UXE8 466 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 LYZL2Q7Z4W2 148 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 Q8IYB0 196 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 TMEM178AQ8NBL3 297 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 NDFIP1Q9BT67 221 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 M0R1X1 148 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 BMP5P22003 454 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 RRADP55042 308 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 FAM3BP58499 235 aaPredicted RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 PRDX4Q13162 271 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 SPACA9Q96E40 222 aaPredicted RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 TBX15Q96SF7 602 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 OCIAD1Q9NX40 245 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 SH3BGRL2Q9UJC5 107 aa15.46■□□□□ 0.07
SPAST-202ENST00000345662 MRPS2Q9Y399 296 aaKnown RBP15.46■□□□□ 0.07
SPAST-202ENST00000345662 A0A1B0GTQ1 180 aa15.46■□□□□ 0.06
SPAST-202ENST00000345662 M0R2Z0 102 aa15.46■□□□□ 0.06
SPAST-202ENST00000345662 CCR5P51681 352 aa15.46■□□□□ 0.06
SPAST-202ENST00000345662 FBXO46Q6PJ61 603 aaPredicted RBP15.46■□□□□ 0.06
SPAST-202ENST00000345662 MRGPRX3Q96LB0 322 aa15.46■□□□□ 0.06
SPAST-202ENST00000345662 MBD1Q9UIS9 605 aaPredicted RBP15.46■□□□□ 0.06
SPAST-202ENST00000345662 CBR3O75828 277 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 TRGC2P03986 189 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 FAM157BP0CG42 384 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 Q5BKY6 102 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 ACSM6Q6P461 480 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 WNT2BQ93097 391 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 ACY3Q96HD9 319 aa15.45■□□□□ 0.06
SPAST-202ENST00000345662 TMEM191AQ9H0A3 160 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms