RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CACNG5Q9UF02 275 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 DGAT2L7PQ6IED9 249 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 BCL7CQ8WUZ0 217 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-201ENST00000345617 ROBO4Q8WZ75 1007 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 APCSP02743 223 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 OR2B11Q5JQS5 317 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 TMEM179BQ7Z7N9 219 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 C12orf76Q8N812 135 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-201ENST00000345617 PMCHL2Q9BQD1 86 aa17.34■□□□□ 0.37
HDAC4-201ENST00000345617 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF98A6NK75 572 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 SLC16A13Q7RTY0 426 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 C9orf62Q8N4C0 152 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 WNT1P04628 370 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 NAT2P11245 290 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 ZNF775Q96BV0 537 aaPredicted RBP17.33■□□□□ 0.37
HDAC4-201ENST00000345617 EMC6Q9BV81 110 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 TIAL1Q01085 375 aaKnown RBP eCLIP17.33■□□□□ 0.372e-7■■■■□ 24.9
HDAC4-201ENST00000345617 ANKRD55Q3KP44 614 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 LIAT1Q6ZQX7 453 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 VN1R2Q8NFZ6 395 aa17.33■□□□□ 0.37
HDAC4-201ENST00000345617 SAP30LQ9HAJ7 183 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 GEMIN2O14893 280 aaKnown RBP17.33■□□□□ 0.36
HDAC4-201ENST00000345617 A0A0B4J2E0 115 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 A0A1B0GX12 115 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 KISS1Q15726 138 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 OR4S2Q8NH73 311 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 UQCR10Q9UDW1 63 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 ST6GAL1P15907 406 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 SLC35E3Q7Z769 313 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 PTOV1Q86YD1 416 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 AMDHD2Q9Y303 409 aa17.33■□□□□ 0.36
HDAC4-201ENST00000345617 FAM78AQ5JUQ0 283 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 A0A087WUJ7 227 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 A0A0U1RQS6 177 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 MFSD2BA6NFX1 497 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 PRKRAO75569 313 aaKnown RBP17.32■□□□□ 0.36
HDAC4-201ENST00000345617 OVCH2Q7RTZ1 564 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 ZNF383Q8NA42 475 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 C16orf52Q8NHV5 167 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 H3BP45 60 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 PLP1P60201 277 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 TMEFF1Q8IYR6 380 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 ADAT3Q96EY9 351 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-201ENST00000345617 SLC22A13Q9Y226 551 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 FAHP16930 419 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 CAPZBP47756 277 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 ING1Q9UK53 422 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-201ENST00000345617 UQCRFS1P47985 274 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 CLDN18P56856 261 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 C9orf152Q5JTZ5 239 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 NUDT16L1Q9BRJ7 211 aaKnown RBP17.32■□□□□ 0.36
HDAC4-201ENST00000345617 MIEN1Q9BRT3 115 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 TCRBV5S1A1TA0A578 114 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 CEBPDP49716 269 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-201ENST00000345617 DIRC3C9JPN6 131 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 OR5AC1P0C628 307 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 KHDC1LQ5JSQ8 128 aa17.32■□□□□ 0.36
HDAC4-201ENST00000345617 D2HGDHQ8N465 521 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 LILRB1Q8NHL6 650 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-201ENST00000345617 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 ARHGAP5-AS1Q96IT6 56 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 IDSB3KWA1 339 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 CEACAM6P40199 344 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 MPV17LQ2QL34 196 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 IER2Q9BTL4 223 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 ELOVL1Q9BW60 279 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 SLC25A22Q9H936 323 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 C21orf58P58505 322 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 IL36GQ9NZH8 169 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 CDC14BO60729 498 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 C20orf141Q9NUB4 165 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 PAM16Q9Y3D7 125 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 ZFPL1O95159 310 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 M0R3E3 92 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 UBE2L3P68036 154 aaKnown RBP17.31■□□□□ 0.36
HDAC4-201ENST00000345617 JOSD1Q15040 202 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-201ENST00000345617 SARAFQ96BY9 339 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 LINC00052Q96N35 136 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 UFC1Q9Y3C8 167 aa17.31■□□□□ 0.36
HDAC4-201ENST00000345617 A0A0A6YYD5 115 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 ANKRD20A5PA0PJZ0 165 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 OR5M9Q8NGP3 310 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 OR1L6Q8NGR2 347 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 KTI12Q96EK9 354 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 LINC00615Q96LM1 132 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 SPACA5Q96QH8 159 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 OPN4Q9UHM6 478 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 OR5B21A6NL26 309 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 SMPD2O60906 423 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 ZNF253O75346 499 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 CLEC12BQ2HXU8 276 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 METAP1P53582 386 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 DSCR4P56555 118 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 FAM109BQ6ICB4 259 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 C1QTNF6Q9BXI9 259 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 PIPOXQ9P0Z9 390 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 NAAAQ02083 359 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 IZUMO4Q1ZYL8 232 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 NPEPL1Q8NDH3 523 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms