RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 GPR27Q9NS67 375 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 LYRM2Q9NU23 88 aaPredicted RBP8.42□□□□□ -1.06
HOXA1-201ENST00000343060 PLEKHJ1Q9NW61 149 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 PPP1R14DQ9NXH3 145 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
HOXA1-201ENST00000343060 FAM24AA6NFZ4 105 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 H3BMH7 237 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 RER1O15258 196 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TRAF3IP2O43734 574 aaPredicted RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 GZMBP10144 247 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 RGS19P49795 217 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 CLRN1P58418 232 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 SRPXP78539 464 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 SMAD4Q13485 552 aaKnown RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TSPO2Q5TGU0 170 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 ZNF283Q8N7M2 679 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TOMM40LQ969M1 308 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 MOB3AQ96BX8 217 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 LIN37Q96GY3 246 aaPredicted RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 REEP6Q96HR9 211 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 MRGPRX1Q96LB2 322 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TGIF2Q9GZN2 237 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 VN1R1Q9GZP7 353 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 PLEKHF2Q9H8W4 249 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 ATXN7L1Q9ULK2 861 aaPredicted RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 PTRH2Q9Y3E5 179 aaKnown RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 CHD7Q9P2D1 2997 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 C5orf63A6NC05 138 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 CLDN34H7C241 214 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 DHRS3O75911 302 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 KLF8O95600 359 aaPredicted RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 MMP9P14780 707 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 MYOGP15173 224 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 CDAP32320 146 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 NUTF2P61970 127 aaKnown RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 ZFP36L1Q07352 338 aaKnown RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 CHAF1BQ13112 559 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 MFAP5Q13361 173 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 HIST3H3Q16695 136 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 AKR1C8PQ5T2L2 129 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TCEAL6Q6IPX3 200 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM252Q8N6L7 170 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 SLC35G3Q8N808 338 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 CCDC71LQ8N9Z2 235 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 RNF138Q8WVD3 245 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 DNASE2BQ8WZ79 361 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 MRPL37Q9BZE1 423 aaKnown RBP8.41□□□□□ -1.06
HOXA1-201ENST00000343060 ZNF700Q9H0M5 742 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 COPS7AQ9UBW8 275 aa8.41□□□□□ -1.06
HOXA1-201ENST00000343060 TRDCB7Z8K6 153 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 TCAPO15273 167 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 OPN1MWP04001 364 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 OPN1MW2P0DN77 364 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 OPN1MW3P0DN78 364 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 FCGR2AP12318 317 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 CTSEP14091 401 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 GABRR1P24046 479 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 NOVA1P51513 510 aaKnown RBP8.4□□□□□ -1.06
HOXA1-201ENST00000343060 H3F3AP84243 136 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 TFF2Q03403 129 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 BAXQ07812 192 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 TAF9Q16594 264 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 SLC25A53Q5H9E4 307 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 C5orf24Q7Z6I8 188 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 UEVLDQ8IX04 471 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 OR5L1Q8NGL2 311 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 CALHM2Q9HA72 323 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 GLRX2Q9NS18 164 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 DKKL1Q9UK85 242 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 NXT1Q9UKK6 140 aaKnown RBP8.4□□□□□ -1.06
HOXA1-201ENST00000343060 CYP8B1Q9UNU6 501 aa8.4□□□□□ -1.06
HOXA1-201ENST00000343060 RP1P56715 2156 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 CLEC18AA5D8T8 446 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 LILRA5A6NI73 299 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 GEMIN2O14893 280 aaKnown RBP8.4□□□□□ -1.07
HOXA1-201ENST00000343060 AMBPP02760 352 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 FUT3P21217 361 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 CD200P41217 278 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 ASCL1P50553 236 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 TLE4Q04727 773 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 PHLDA2Q53GA4 152 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 DTX1Q86Y01 620 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 TGIF2LXQ8IUE1 241 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 CLEC18CQ8NCF0 446 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 NPRL2Q8WTW4 380 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.4□□□□□ -1.07
HOXA1-201ENST00000343060 PGAM5Q96HS1 289 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 NUDT22Q9BRQ3 303 aa8.4□□□□□ -1.07
HOXA1-201ENST00000343060 CISD1Q9NZ45 108 aaKnown RBP8.4□□□□□ -1.07
HOXA1-201ENST00000343060 SPTY2D1-AS1A0A0U1RR47 76 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 VSTM2BA6NLU5 285 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 ZNF850A8MQ14 1090 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 B4DGG1 531 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 PROB1E7EW31 1015 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 PHF1O43189 567 aaPredicted RBP8.39□□□□□ -1.07
HOXA1-201ENST00000343060 IL18BPO95998 194 aa8.39□□□□□ -1.07
HOXA1-201ENST00000343060 QDPRP09417 244 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms