RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OR2A4O95047 310 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 LIFP15018 202 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 ZNF345Q14585 488 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 SSPNQ14714 243 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 PLGLAQ15195 96 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 PDZD11Q5EBL8 140 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 CLEC9AQ6UXN8 241 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 NANPQ8TBE9 248 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 OR2A7Q96R45 310 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 SOSTQ9BQB4 213 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 CABLES2Q9BTV7 478 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 SLC2A9Q9NRM0 540 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 DOCK6Q96HP0 2047 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 TRGV5A0A0B4J1U4 118 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 A0A1W2PR80 420 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 TRAF3IP2O43734 574 aaPredicted RBP6.32□□□□□ -1.4
VCAN-202ENST00000342785 S100A8P05109 93 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 TEX30Q5JUR7 227 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 FAM27BQ5VT28 67 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 SLC35G3Q8N808 338 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 C10orf35Q96D05 121 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 PATZ1Q9HBE1 687 aaKnown RBP6.32□□□□□ -1.4
VCAN-202ENST00000342785 KCNIP2Q9NS61 270 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 LPAR3Q9UBY5 353 aa6.32□□□□□ -1.4
VCAN-202ENST00000342785 MDFIC2A0A1B0GVS7 189 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ZBTB25P24278 435 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 IL13RA2Q14627 380 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 OR8B8Q15620 311 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 SPINK14Q6IE38 97 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 LHFPL5Q8TAF8 219 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ZNF519Q8TB69 540 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 PLPPR2Q96GM1 343 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 HDHD3Q9BSH5 251 aaPredicted RBP6.31□□□□□ -1.4
VCAN-202ENST00000342785 GPR132Q9UNW8 380 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 RGPD4Q7Z3J3 1758 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 MT-CO3P00414 261 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 PDGFBP01127 241 aaPredicted RBP6.31□□□□□ -1.4
VCAN-202ENST00000342785 HEXAP06865 529 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 SLC25A4P12235 298 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 COX5AP20674 150 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 VDAC1P21796 283 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 GPR12P47775 334 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 LIAT1Q6ZQX7 453 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ZADH2Q8N4Q0 377 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 M1APQ8TC57 530 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ABHD3Q8WU67 409 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 PMS2P1A4D2B8 440 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 PRSS44E7EML9 344 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 DNPH1O43598 174 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 IL2RAP01589 272 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ISG15P05161 165 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 CELA2AP08217 269 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 VAX1Q5SQQ9 334 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 LINC00114Q6XXX2 140 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 LYZL2Q7Z4W2 148 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ADGRG7Q96K78 797 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 WDR54Q9H977 334 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 NGFP01138 241 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 PPYP01298 95 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 CST2P09228 141 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 CLEC12BQ2HXU8 276 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 TMEM255AQ5JRV8 349 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 EDARADDQ8WWZ3 215 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 BTF3L4Q96K17 158 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 SLC35B3Q9H1N7 401 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 LHFPL6Q9Y693 200 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 FAM24BQ8N5W8 94 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 SLC39A7Q92504 469 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 CLDN23Q96B33 292 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 GALMQ96C23 342 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 CIB3Q96Q77 187 aaPredicted RBP6.31□□□□□ -1.4
VCAN-202ENST00000342785 GPR27Q9NS67 375 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 TMEM38BQ9NVV0 291 aa6.31□□□□□ -1.4
VCAN-202ENST00000342785 ADAM10O14672 748 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 NQO2P16083 231 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 NDUFB7P17568 137 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 KCNJ3P48549 501 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 C4orf17Q53FE4 359 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 OR4F5Q8NH21 305 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 OR4F4Q96R69 305 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 EDEM2Q9BV94 578 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 CACNG5Q9UF02 275 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 AMDHD2Q9Y303 409 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 SRCAPQ6ZRS2 3230 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 KCNAB3O43448 404 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 SCAF4O95104 1147 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 CALCRP30988 508 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 RNPS1Q15287 305 aaKnown RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 MOB1BQ7L9L4 216 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 TUSC5Q8IXB3 177 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ERGIC1Q969X5 290 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 OR2H1Q9GZK4 316 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 G6PC2Q9NQR9 355 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 BDP1A6H8Y1 2624 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 OTOFQ9HC10 1997 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 ARHGEF17Q96PE2 2063 aaPredicted RBP6.3□□□□□ -1.4
VCAN-202ENST00000342785 OR5B21A6NL26 309 aa6.3□□□□□ -1.4
VCAN-202ENST00000342785 LYPD3O95274 346 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms