RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 OR5R1Q8NH85 324 aa13.27□□□□□ -0.29
UBE3B-202ENST00000342494 GMPPAQ96IJ6 420 aaPredicted RBP13.27□□□□□ -0.29
UBE3B-202ENST00000342494 LYZP61626 148 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 HIKESHIQ53FT3 197 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 SPINK9Q5DT21 86 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 PDZD11Q5EBL8 140 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 C1QL3Q5VWW1 255 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 CLN8Q9UBY8 286 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 CACNG5Q9UF02 275 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 A0A1W2PPQ1 181 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 DHRS7BQ6IAN0 325 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-202ENST00000342494 CADM3Q8N126 398 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 ZDHHC22Q8N966 263 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 CXorf58Q96LI9 332 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 ZNF586Q9NXT0 402 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 SPRED2Q7Z698 418 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 ZNF665Q9H7R5 613 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 SLC45A2Q9UMX9 530 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 YTHDF2Q9Y5A9 579 aaKnown RBP13.26□□□□□ -0.29
UBE3B-202ENST00000342494 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 PCOLCE2Q9UKZ9 415 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 TCRBV16S1A1N1A0A5B0 115 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 IGHV4-34P06331 123 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 CNTD2Q9H8S5 307 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 GPR35Q9HC97 309 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 POMT1Q9Y6A1 747 aa13.26□□□□□ -0.29
UBE3B-202ENST00000342494 HAND1O96004 215 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 LIFP15018 202 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 GAMTQ14353 236 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 C1orf185Q5T7R7 199 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 INO80CQ6PI98 192 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-202ENST00000342494 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 DOK5Q9P104 306 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 PTHLHP12272 177 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 C4orf17Q53FE4 359 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 FBXW9Q5XUX1 488 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 SLC16A12Q6ZSM3 486 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 ATG4DQ86TL0 474 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-202ENST00000342494 TTTY12Q9BZ98 90 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 TMEFF2Q9UIK5 374 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-202ENST00000342494 ACSM4P0C7M7 580 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 CD96P40200 585 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 SLC24A4Q8NFF2 622 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 ZDHHC11Q9H8X9 412 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 ZMIZ1Q9ULJ6 1067 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 BCL2L11O43521 198 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 IGHA1P01876 353 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 IGHA2P01877 340 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 ORM2P19652 201 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 SPICQ8N5J4 248 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 SRRQ9GZT4 340 aa13.25□□□□□ -0.29
UBE3B-202ENST00000342494 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
UBE3B-202ENST00000342494 GPR6P46095 362 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-202ENST00000342494 PJVKQ0ZLH3 352 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 FA2HQ7L5A8 372 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 UCN2Q96RP3 112 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 CA10Q9NS85 328 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 OOEPA6NGQ2 149 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 HRKO00198 91 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 CDC42EP2O14613 210 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 SEMA7AO75326 666 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 AMTP48728 403 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 BAK1Q16611 211 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 OR2H1Q9GZK4 316 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 OXA1LQ15070 435 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 TGIF2LYQ8IUE0 185 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 TGIF2LXQ8IUE1 241 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 LOC102723971A0A1B0GUV8 181 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 COL19A1Q14993 1142 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 OR2M3Q8NG83 312 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 SLC25A40Q8TBP6 338 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 INSIG2Q9Y5U4 225 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 GNG7O60262 68 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 MRM1Q6IN84 353 aaKnown RBP13.24□□□□□ -0.29
UBE3B-202ENST00000342494 GPR27Q9NS67 375 aa13.24□□□□□ -0.29
UBE3B-202ENST00000342494 ATP6V1G2-DDX39BF2Z307 99 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 MOSPD3O75425 235 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 ZNF770Q6IQ21 691 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-202ENST00000342494 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 CTAG2O75638 210 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 FGF9P31371 208 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-202ENST00000342494 MESTQ5EB52 335 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 CD300LDQ6UXZ3 194 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 MS4A7Q9GZW8 240 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-202ENST00000342494 SHROOM3Q8TF72 1996 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 LTBP4Q8N2S1 1624 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 TGOLN2O43493 480 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 GZMHP20718 246 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 KRTCAP3Q53RY4 240 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 DYNLRB2Q8TF09 96 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 NTNG2Q96CW9 530 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 Q1RN00 199 aa13.23□□□□□ -0.29
UBE3B-202ENST00000342494 C11orf87Q6NUJ2 197 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms