RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ST3GAL6Q9Y274 331 aa14.1□□□□□ -0.15
LITAF-201ENST00000339430 MSRB2Q9Y3D2 182 aa14.1□□□□□ -0.15
LITAF-201ENST00000339430 APC2O95996 2303 aa14.1□□□□□ -0.15
LITAF-201ENST00000339430 RRP8O43159 456 aaKnown RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 FGF16O43320 207 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 GLI4P10075 376 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 EDN3P14138 238 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 GFRA1P56159 465 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 KRTAP27-1Q3LI81 207 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 PLEKHN1Q494U1 663 aaPredicted RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 OSR2Q8N2R0 312 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 MDS2Q8NDY4 140 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 CPEB3Q8NE35 698 aaKnown RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 MRPL24Q96A35 216 aaKnown RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 AQP10Q96PS8 301 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 C12orf4Q9NQ89 552 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 A0A096LPE4 126 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 A0A1W2PPZ6 126 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 BET1O15155 118 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 CYTIPO60759 359 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 CTSDP07339 412 aaPredicted RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 PIGPP57054 158 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 SRSF3P84103 164 aaKnown RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 IL15RAQ13261 267 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 SLC22A25Q6T423 547 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 CCDC36Q8IYA8 594 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 CPNE4Q96A23 557 aaPredicted RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 CPNE2Q96FN4 548 aaPredicted RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 NECAP2Q9NVZ3 263 aa14.09□□□□□ -0.15
LITAF-201ENST00000339430 BOKQ9UMX3 212 aaPredicted RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 NOSIPQ9Y314 301 aaKnown RBP14.09□□□□□ -0.15
LITAF-201ENST00000339430 CRYM-AS1A6NIL9 109 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 SCGB1D2O95969 90 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 ACTL6AO96019 429 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 SP1P08047 785 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 PET100P0DJ07 73 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 CCL2P13500 99 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 NAAAQ02083 359 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 PDZK1IP1Q13113 114 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 TMEM42Q69YG0 159 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 OR2A2Q6IF42 318 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 CALHM1Q8IU99 346 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 FNDC9Q8TBE3 224 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 RNF141Q8WVD5 230 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 WNT2BQ93097 391 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 SLC5A7Q9GZV3 580 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 HSF4Q9ULV5 492 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 SLC7A11Q9UPY5 501 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 MEMO1Q9Y316 297 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 ZNF407Q9C0G0 2248 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 DNAJC13O75165 2243 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 FAM74A7A6NL05 159 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 ZNF708P17019 499 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 RCC1P18754 421 aaPredicted RBP14.08□□□□□ -0.16
LITAF-201ENST00000339430 PCBD1P61457 104 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 FAM74A3Q4VXF1 159 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 RIPPLY2Q5TAB7 128 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 GGNBP1Q5YKI7 109 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 NSUN5P2Q63ZY6 315 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 RPL7L1Q6DKI1 246 aaKnown RBP14.08□□□□□ -0.16
LITAF-201ENST00000339430 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 EDARQ9UNE0 448 aa14.08□□□□□ -0.16
LITAF-201ENST00000339430 LSM5Q9Y4Y9 91 aaKnown RBP14.08□□□□□ -0.16
LITAF-201ENST00000339430 ZNF705EA8MWA4 302 aaPredicted RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 TRIM77I1YAP6 450 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 NME2P1O60361 137 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 MRPL33O75394 65 aaKnown RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 MMP7P09237 267 aaPredicted RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 CD46P15529 392 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 NME2P22392 152 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 ECI1P42126 302 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 FUT6P51993 359 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 PHLDA2Q53GA4 152 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 SLC6A15Q9H2J7 730 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 SLC7A10Q9NS82 523 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 SHANK1Q9Y566 2161 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 ACACAQ13085 2346 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 FAM166BA8MTA8 275 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 DNASE2O00115 360 aaPredicted RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 CDK2AP1O14519 115 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 ABCD4O14678 606 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 FARS2O95363 451 aaKnown RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 ZNF728P0DKX0 622 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 HKR1P10072 659 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 CD79AP11912 226 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 NPBWR2P48146 333 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 FOXG1P55316 489 aaPredicted RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 ASCL4Q6XD76 172 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 SNIP1Q8TAD8 396 aaKnown RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 CNTNAP3BQ96NU0 1288 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 CNTNAP3Q9BZ76 1288 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 CALHM2Q9HA72 323 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 BCO1Q9HAY6 547 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 TMEM100Q9NV29 134 aa14.07□□□□□ -0.16
LITAF-201ENST00000339430 KLF13Q9Y2Y9 288 aaPredicted RBP14.07□□□□□ -0.16
LITAF-201ENST00000339430 DMXL2Q8TDJ6 3036 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 OR5AC1P0C628 307 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 FCGR2CP31995 323 aa14.06□□□□□ -0.16
LITAF-201ENST00000339430 ABCA11PQ4W5N1 156 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms