RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 PPP1R35Q8TAP8 253 aa13.08□□□□□ -0.32
MRPL55-202ENST00000336300 DERL3Q96Q80 235 aa13.08□□□□□ -0.32
MRPL55-202ENST00000336300 MGLLQ99685 303 aa13.08□□□□□ -0.32
MRPL55-202ENST00000336300 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
MRPL55-202ENST00000336300 SEBOXQ9HB31 216 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-202ENST00000336300 HMG20AQ9NP66 347 aa13.08□□□□□ -0.32
MRPL55-202ENST00000336300 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.32
MRPL55-202ENST00000336300 MEGF11A6BM72 1044 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 HAND1O96004 215 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 TK1P04183 234 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 SELLP14151 372 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 PTGFRP43088 359 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 MAP2K4P45985 399 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 MTNR1BP49286 362 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 CEBPDP49716 269 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-202ENST00000336300 ZP1P60852 638 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 FGF12P61328 243 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 ARF6P62330 175 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 COL10A1Q03692 680 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 TPBGQ13641 420 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 BLMHQ13867 455 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 CEACAM19Q7Z692 300 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 CDH26Q8IXH8 852 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 LY6G5BQ8NDX9 201 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 SNX22Q96L94 193 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 METTL9Q9H1A3 318 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 TCF7L1Q9HCS4 588 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
MRPL55-202ENST00000336300 NOX4Q9NPH5 578 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 ONECUT1Q9UBC0 465 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 NUP50Q9UKX7 468 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 ING4Q9UNL4 249 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 GSTK1Q9Y2Q3 226 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 LRRC42Q9Y546 428 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
MRPL55-202ENST00000336300 IGKV1-12A0A0C4DH73 117 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 K7N7A8 449 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 GABRPO00591 440 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 ZNF780AO75290 641 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-202ENST00000336300 IGKV1D-12P01611 117 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 CSTBP04080 98 aaKnown RBP13.06□□□□□ -0.32
MRPL55-202ENST00000336300 MAS1P04201 325 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 CPEP16870 476 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 EPHA1P21709 976 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 GABRR1P24046 479 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 PDCD1Q15116 288 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 ASPHD2Q6ICH7 369 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 UNQ9370/PRO34162Q6UXP9 181 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 GDPD3Q7L5L3 318 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 FGFRL1Q8N441 504 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 BPIFB2Q8N4F0 458 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 NKAIN3Q8N8D7 197 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 ZNF418Q8TF45 676 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-202ENST00000336300 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 ORAI1Q96D31 301 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 WDFY2Q96P53 400 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 ACOT13Q9NPJ3 140 aa13.06□□□□□ -0.32
MRPL55-202ENST00000336300 JMJD1CQ15652 2540 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 NAV3Q8IVL0 2385 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 TRAV8-7A0A075B6U6 113 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 hCG_1809904A0A1W2PP81 198 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 A0A1W2PPE2 198 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 A0A1W2PR64 198 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 A0A1W2PRV1 198 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 FCN3O75636 299 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 SFTPBP07988 381 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 CALCBP10092 127 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 DUSP1P28562 367 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 SNU13P55769 128 aaKnown RBP13.05□□□□□ -0.32
MRPL55-202ENST00000336300 BPIFB3P59826 476 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 RPL31P62899 125 aaKnown RBP13.05□□□□□ -0.32
MRPL55-202ENST00000336300 EMX1Q04741 257 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-202ENST00000336300 GPR176Q14439 515 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 KRTAP21-3Q3LHN1 58 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 HSD17B12Q53GQ0 312 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 ELP2Q6IA86 826 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 RNF144BQ7Z419 303 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 PRIMA1Q86XR5 153 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 FAM185AQ8N0U4 392 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 KIR3DL3Q8N743 410 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 PHYHIPQ92561 330 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 TMEM203Q969S6 136 aa13.05□□□□□ -0.32
MRPL55-202ENST00000336300 FOXRED1Q96CU9 486 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-202ENST00000336300 MS4A7Q9GZW8 240 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-202ENST00000336300 FUOMA2VDF0 154 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 DEGS1O15121 323 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 TCF21O43680 179 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 ARL6IP5O75915 188 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 HTR3BO95264 441 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 ZNF44P15621 663 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 SRMP19623 302 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 SCN1BQ07699 218 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 GLT8D1Q68CQ7 371 aa13.04□□□□□ -0.32
MRPL55-202ENST00000336300 CRIP3Q6Q6R5 217 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms