RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 RAB4BP61018 213 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 NUTF2P61970 127 aaKnown RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 FZD2Q14332 565 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 ZNF429Q86V71 674 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 SLC38A9Q8NBW4 561 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 NTNG2Q96CW9 530 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 METTL9Q9H1A3 318 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 SIRT7Q9NRC8 400 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 PHF3Q92576 2039 aaKnown RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 CCDC163A0A0D9SF12 145 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 VSTM2BA6NLU5 285 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BKO60814 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BJP06899 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 FAHP16930 419 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 ZNF17P17021 662 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BOP23527 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BBP33778 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 ECI1P42126 302 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 ARL4DP49703 201 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 SUCLG1P53597 346 aaKnown RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 UCP2P55851 309 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BDP58876 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BCP62807 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST2H2BEQ16778 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 AKR1C8PQ5T2L2 129 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 LRRC18Q8N456 261 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BHQ93079 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 FAM131CQ96AQ9 280 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BNQ99877 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HIST1H2BMQ99879 126 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 NIPSNAP3BQ9BS92 247 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 VN1R1Q9GZP7 353 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 AK3Q9UIJ7 227 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 ZDHHC8Q9ULC8 765 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 KNTC1P50748 2209 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 FAM221AA4D161 298 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 RND3P61587 244 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 C1orf189Q5VU69 101 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 UEVLDQ8IX04 471 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 SNIP1Q8TAD8 396 aaKnown RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 HLA-CQ95604 372 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 DDIT4LQ96D03 193 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 FAAP24Q9BTP7 215 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 DUSP15Q9H1R2 295 aaPredicted RBP12.01□□□□□ -0.49
SYNE3-201ENST00000334258 MYO7BQ6PIF6 2116 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 FAM24AA6NFZ4 105 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 ZNF724A8MTY0 619 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 ATXN7O15265 892 aaPredicted RBP12□□□□□ -0.49
SYNE3-201ENST00000334258 PDGFBP01127 241 aaPredicted RBP12□□□□□ -0.49
SYNE3-201ENST00000334258 DUSP1P28562 367 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 ARL6IP1Q15041 203 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 TAF9Q16594 264 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 FAM89BQ8N5H3 189 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 NAA60Q9H7X0 242 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 ANXA10Q9UJ72 324 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 IGHV3-20A0A0C4DH32 117 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 TLCD2A6NGC4 264 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 RRP8O43159 456 aaKnown RBP12□□□□□ -0.49
SYNE3-201ENST00000334258 PHF1O43189 567 aaPredicted RBP12□□□□□ -0.49
SYNE3-201ENST00000334258 IGHG1P01857 330 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 SOD3P08294 240 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 GUCA1AP43080 201 aaPredicted RBP12□□□□□ -0.49
SYNE3-201ENST00000334258 ERVFRD-1P60508 538 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 ELOBQ15370 118 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 KHDC3LQ587J8 217 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 THEM4Q5T1C6 240 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 C16orf54Q6UWD8 224 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 GALNT14Q96FL9 552 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 SLC7A11Q9UPY5 501 aa12□□□□□ -0.49
SYNE3-201ENST00000334258 SRFP11831 508 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 ZP4Q12836 540 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 FOXF1Q12946 379 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 BRICD5Q6PL45 260 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 CYB561D1Q8N8Q1 229 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 CFAP47Q6ZTR5 3102 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 FAM230AA0A1W2PPH8 454 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 C5orf63A6NC05 138 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 OR5H15A6NDH6 313 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 OR5H1A6NKK0 313 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 JMJD7P0C870 316 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 TNFRSF9Q07011 255 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 TMEM217Q8N7C4 229 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 ZPBPQ9BS86 351 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 LRRC61Q9BV99 259 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 BCO1Q9HAY6 547 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 ZNF160Q9HCG1 818 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 WSB1Q9Y6I7 421 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 SPTY2D1-AS1A0A0U1RR47 76 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 K7N7A8 449 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 HSPA12AO43301 675 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 ANGPTL7O43827 346 aa11.99□□□□□ -0.49
SYNE3-201ENST00000334258 QDPRP09417 244 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms