RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 ELMOD3Q96FG2 381 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 C1orf147Q96MC9 270 aaPredicted RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 C7orf50Q9BRJ6 194 aaKnown RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 NUDT16L1Q9BRJ7 211 aaKnown RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 URM1Q9BTM9 101 aaKnown RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 PAPOLGQ9BWT3 736 aaKnown RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 TMEM59Q9BXS4 323 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 C11orf54Q9H0W9 315 aaPredicted RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 CST11Q9H112 138 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 POFUT1Q9H488 388 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 SAP30LQ9HAJ7 183 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 YAE1D1Q9NRH1 226 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 PCDHB16Q9NRJ7 776 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 MYEF2Q9P2K5 600 aaKnown RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 CDC42EP3Q9UKI2 254 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 MPC1Q9Y5U8 109 aa8.24□□□□□ -1.09
SYN3-201ENST00000332840 HEATR1Q9H583 2144 aaKnown RBP8.24□□□□□ -1.09
SYN3-201ENST00000332840 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.24□□□□□ -1.09
SYN3-201ENST00000332840 IGHV4-61A0A0C4DH41 118 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 IGHV1-69-2A0A0G2JMI3 117 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 ZNF850A8MQ14 1090 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 CENPXA8MT69 81 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 LYRM1O43325 122 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 LANCL1O43813 399 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 TIMM8AO60220 97 aaPredicted RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 ZNF780AO75290 641 aaPredicted RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 KDM4BO94953 1096 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 MPIG6BO95866 241 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 ECDO95905 644 aaPredicted RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 HPXP02790 462 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 CD3GP09693 182 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 TMEM225BP0DP42 221 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 RAC2P15153 192 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 HNF1AP20823 631 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 TNFSF4P23510 183 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 PRSS3P35030 304 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 AP3S2P59780 193 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 ZP1P60852 638 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 UNC119Q13432 240 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 DYRK1AQ13627 763 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 HLXQ14774 488 aaPredicted RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 HFEQ30201 348 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 RNASE12Q5GAN4 147 aaKnown RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 DMRTC1Q5HYR2 192 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 SPATA46Q5T0L3 261 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 CCBE1Q6UXH8 406 aaPredicted RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 ZDHHC23Q8IYP9 409 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 TOMM5Q8N4H5 51 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 PXT1Q8NFP0 134 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 OR5A2Q8NGI9 324 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 OR52I2Q8NH67 350 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 SPATA3Q8NHX4 192 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 CMBLQ96DG6 245 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 TIMD4Q96H15 378 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 METTL9Q9H1A3 318 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 RBFOX1Q9NWB1 397 aaKnown RBP8.23□□□□□ -1.09
SYN3-201ENST00000332840 KCNS2Q9ULS6 477 aa8.23□□□□□ -1.09
SYN3-201ENST00000332840 hCG_2014768A0A024R1R8 64 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 RAB27BO00194 218 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 ORC5O43913 435 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 CDC14BO60729 498 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 CRTAPO75718 401 aaPredicted RBP8.22□□□□□ -1.09
SYN3-201ENST00000332840 RBBP9O75884 186 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 IFNA2P01563 188 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 CSTBP04080 98 aaKnown RBP8.22□□□□□ -1.09
SYN3-201ENST00000332840 CD55P08174 381 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 IGHV4-31P0DP07 118 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 TNFRSF1AP19438 455 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 KITLGP21583 273 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 MPV17P39210 176 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 GDNFP39905 211 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 RFX2P48378 723 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 VEGFCP49767 419 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 CCL8P80075 99 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 SSBP1Q04837 148 aaKnown RBP8.22□□□□□ -1.09
SYN3-201ENST00000332840 RSU1Q15404 277 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 CEACAM21Q3KPI0 293 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 ALKBH6Q3KRA9 238 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 CHRFAM7AQ494W8 412 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 SLC22A6Q4U2R8 563 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 OR2T2Q6IF00 324 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 ASCL4Q6XD76 172 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 C1QL2Q7Z5L3 287 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 NRARPQ7Z6K4 114 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 ZSCAN4Q8NAM6 433 aaPredicted RBP8.22□□□□□ -1.09
SYN3-201ENST00000332840 CHST4Q8NCG5 386 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 OR56B1Q8NGI3 324 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 OR5D18Q8NGL1 313 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 OR10R2Q8NGX6 335 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 ENKURQ8TC29 256 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 DEDD2Q8WXF8 326 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 GAL3ST1Q99999 423 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 LPAR5Q9H1C0 372 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 AUNIPQ9H7T9 357 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 SCPEP1Q9HB40 452 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 ELL3Q9HB65 397 aaPredicted RBP8.22□□□□□ -1.09
SYN3-201ENST00000332840 TAS2R8Q9NYW2 309 aa8.22□□□□□ -1.09
SYN3-201ENST00000332840 PURGQ9UJV8 347 aaKnown RBP8.22□□□□□ -1.09
SYN3-201ENST00000332840 RBMX2Q9Y388 322 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms