RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 LIME1Q9H400 295 aa15.27■□□□□ 0.04
SYNE4-201ENST00000324444 MTCH1Q9NZJ7 389 aa15.27■□□□□ 0.04
SYNE4-201ENST00000324444 EDARQ9UNE0 448 aa15.27■□□□□ 0.04
SYNE4-201ENST00000324444 MAP1AP78559 2803 aaPredicted RBP15.27■□□□□ 0.03
SYNE4-201ENST00000324444 CENPXA8MT69 81 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 GLAP06280 429 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 SFTPBP07988 381 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 CSF3P09919 207 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 HIST1H1DP16402 221 aaKnown RBP15.26■□□□□ 0.03
SYNE4-201ENST00000324444 BCL3P20749 454 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 CBX5P45973 191 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 ACTBP60709 375 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 ACTG1P63261 375 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 RGS21Q2M5E4 152 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 ZNF260Q3ZCT1 412 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 SPIN3Q5JUX0 258 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 SPNS3Q6ZMD2 512 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 WDR86Q86TI4 376 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 FAM90A1Q86YD7 464 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 LYSMD2Q8IV50 215 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 MUC15Q8N387 334 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 MINDY2Q8NBR6 621 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 OR11L1Q8NGX0 322 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 HPS1Q92902 700 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 EMG1Q92979 244 aaKnown RBP15.26■□□□□ 0.03
SYNE4-201ENST00000324444 FBXW5Q969U6 566 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 HS3ST6Q96QI5 342 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 OR2V2Q96R30 315 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 PLEKHJ1Q9NW61 149 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 PLEKHA6Q9Y2H5 1048 aa15.26■□□□□ 0.03
SYNE4-201ENST00000324444 A0A1W2PP11 408 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 SYNGR1O43759 233 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 NXPH2O95156 264 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 IGHV1-46P01743 117 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 LPLP06858 475 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 IRF2P14316 349 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 PRKACAP17612 351 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 GABRR1P24046 479 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 ERVK11-1P61568 191 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 MRPS15P82914 257 aaKnown RBP15.25■□□□□ 0.03
SYNE4-201ENST00000324444 BAK1Q16611 211 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 AGAP6Q5VW22 663 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 DNM1P46Q6ZS02 220 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 DTX3Q8N9I9 347 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 NRIP2Q9BQI9 281 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 C7orf50Q9BRJ6 194 aaKnown RBP15.25■□□□□ 0.03
SYNE4-201ENST00000324444 DECR2Q9NUI1 292 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 ZNF107Q9UII5 783 aaPredicted RBP15.25■□□□□ 0.03
SYNE4-201ENST00000324444 ITPR3Q14573 2671 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 MTORP42345 2549 aa15.25■□□□□ 0.03
SYNE4-201ENST00000324444 MED13LQ71F56 2210 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 hCG_1807616A0A1W2PRN6 198 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 LRRC30A6NM36 301 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 FUT3P21217 361 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 NPBWR2P48146 333 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 GNG2P59768 71 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 TAF9Q16594 264 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 SMIM21Q3B7S5 101 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 STEAP3Q658P3 488 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 MZT2BQ6NZ67 158 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 TOMM5Q8N4H5 51 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 NINJ1Q92982 152 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 NICN1Q9BSH3 213 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 C1orf123Q9NWV4 160 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 ROS1P08922 2347 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 A0A1W2PQ09 198 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 H7C417 338 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 SOCS1O15524 211 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 PDCD6O75340 191 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 CSF1P09603 554 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 FAUP35544 74 aaKnown RBP15.24■□□□□ 0.03
SYNE4-201ENST00000324444 MADCAM1Q13477 382 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 DYRK1AQ13627 763 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 RBM39Q14498 530 aaKnown RBP15.24■□□□□ 0.03
SYNE4-201ENST00000324444 MOGAT2Q3SYC2 334 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 ZNF57Q68EA5 555 aaPredicted RBP15.24■□□□□ 0.03
SYNE4-201ENST00000324444 WDR82Q6UXN9 313 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 BIVMQ86UB2 503 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 Q8TCH9 128 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 GPX8Q8TED1 209 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 YIPF5Q969M3 257 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 COX4I2Q96KJ9 171 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 IFT22Q9H7X7 185 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 SEBOXQ9HB31 216 aaPredicted RBP15.24■□□□□ 0.03
SYNE4-201ENST00000324444 RBFOX1Q9NWB1 397 aaKnown RBP15.24■□□□□ 0.03
SYNE4-201ENST00000324444 MTFP1Q9UDX5 166 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 RBMX2Q9Y388 322 aaKnown RBP15.24■□□□□ 0.03
SYNE4-201ENST00000324444 NPTNQ9Y639 398 aa15.24■□□□□ 0.03
SYNE4-201ENST00000324444 A0A0A6YYD4 124 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 FOXI3A8MTJ6 420 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-201ENST00000324444 MFNGO00587 321 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 HS3ST1O14792 307 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 SH2D1BO14796 132 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 GEMIN2O14893 280 aaKnown RBP15.23■□□□□ 0.03
SYNE4-201ENST00000324444 RHBDL1O75783 438 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 OR7C1O76099 320 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-201ENST00000324444 KNG1P01042 644 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 GLRA1P23415 457 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 PPOXP50336 477 aa15.23■□□□□ 0.03
SYNE4-201ENST00000324444 TMEM50BP56557 158 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms