RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PAPOLGQ9BWT3 736 aaKnown RBP15.07■□□□□ 0
COL9A1-201ENST00000320755 NAA60Q9H7X0 242 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 SLC2A9Q9NRM0 540 aa15.07■□□□□ 0
COL9A1-201ENST00000320755 YKT6O15498 198 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 PHF1O43189 567 aaPredicted RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 CA11O75493 328 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 EDN3P14138 238 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 PVALBP20472 110 aaPredicted RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 IGSF11Q5DX21 431 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 Q6ZRG5 221 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 Q6ZSR3 168 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 WDR5BQ86VZ2 330 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 SPAG16Q8N0X2 631 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 THOC3Q96J01 351 aaKnown RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 CALHM2Q9HA72 323 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 LRFN1Q9P244 771 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 NOSIPQ9Y314 301 aaKnown RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 CCDC163A0A0D9SF12 145 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 hCG_38984A0A1B0GV85 526 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 SLC33A1O00400 549 aaPredicted RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 MRPL33O75394 65 aaKnown RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 HLA-HP01893 362 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 DUSP1P28562 367 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 FOXG1P55316 489 aaPredicted RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 SWI5Q1ZZU3 235 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 UBALD2Q8IYN6 164 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 MLXQ9UH92 298 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 HSF4Q9ULV5 492 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 C3orf80F5H4A9 247 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 CST4P01036 141 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 FUT6P51993 359 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 EIF5AP63241 154 aaKnown RBP15.06■□□□□ 0
COL9A1-201ENST00000320755 OR52M1Q8NGK5 317 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 ZNF286AQ9HBT8 521 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 AMDHD2Q9Y303 409 aa15.06■□□□□ 0
COL9A1-201ENST00000320755 PCP4L1A6NKN8 68 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 RNASEK-C17orf49H0YIS7 233 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 TAAR5O14804 337 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 ECI1P42126 302 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 TMEM187Q14656 261 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 DHRS11Q6UWP2 260 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 SUMF1Q8NBK3 374 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 CCDC54Q8NEL0 328 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 NRIP2Q9BQI9 281 aa15.05■□□□□ 0
COL9A1-201ENST00000320755 MED13Q9UHV7 2174 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 FAM166BA8MTA8 275 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 C9JQL5 133 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 OR8U9P0C7N5 309 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 AADACP22760 399 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 AKR1C3P42330 323 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 CAV2P51636 162 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 PCBD1P61457 104 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 HERV-K104P61576 105 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 ARF1P84077 181 aaKnown RBP15.05■□□□□ -0
COL9A1-201ENST00000320755 SPIN3Q5JUX0 258 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 C6orf15Q6UXA7 325 aaPredicted RBP15.05■□□□□ -0
COL9A1-201ENST00000320755 OR8U1Q8NH10 309 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 ADGRG7Q96K78 797 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 SMIM8Q96KF7 97 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 OR51B6Q9H340 312 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 SLC7A10Q9NS82 523 aa15.05■□□□□ -0
COL9A1-201ENST00000320755 SFTA3P0C7M3 94 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 DTYMKP23919 212 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 FHITP49789 147 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 ZNF616Q08AN1 781 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 IL34Q6ZMJ4 242 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 Q6ZPA2 131 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 OR56B2PQ8NGI1 322 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 NEK7Q8TDX7 302 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 SLAMF9Q96A28 289 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 HS3ST6Q96QI5 342 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 PARPBPQ9NWS1 579 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 CRIM1Q9NZV1 1036 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 ZNF816-ZNF321PA0A0X1KG74 233 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 C5orf49A4QMS7 147 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 DNPH1O43598 174 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 NME2P1O60361 137 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 PDCD6O75340 191 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 GLP1RP43220 463 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 FAM76BQ5HYJ3 339 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 GLYATL2Q8WU03 294 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 PLA2G3Q9NZ20 509 aa15.04■□□□□ -0
COL9A1-201ENST00000320755 C1QL1O75973 258 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 GPM6AP51674 278 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 AKR1D1P51857 326 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 NSUN5P2Q63ZY6 315 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 TMEM42Q69YG0 159 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 FBXW12Q6X9E4 464 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 NTNG2Q96CW9 530 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 SAT2Q96F10 170 aaPredicted RBP15.03■□□□□ -0
COL9A1-201ENST00000320755 IL36RNQ9UBH0 155 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 TUBD1Q9UJT1 453 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 JTBO76095 146 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 SNAPINO95295 136 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 HAAOP46952 286 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 RBM11P57052 281 aaKnown RBP15.03■□□□□ -0
COL9A1-201ENST00000320755 NHLH2Q02577 135 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 TUSC5Q8IXB3 177 aa15.03■□□□□ -0
COL9A1-201ENST00000320755 HSD17B11Q8NBQ5 300 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms