RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 IFT22Q9H7X7 185 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 DIABLOQ9NR28 239 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 DCAF16Q9NXF7 216 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 NLKQ9UBE8 527 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 RABL2AQ9UBK7 228 aaPredicted RBP11.42□□□□□ -0.58
PRPF18-201ENST00000320054 GLS2Q9UI32 602 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 RABL2BQ9UNT1 228 aa11.42□□□□□ -0.58
PRPF18-201ENST00000320054 PPIAL4EA0A075B759 164 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 A0A0A6YYD4 124 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 TRAV38-1A0A0B4J264 116 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 OOEPA6NGQ2 149 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 CLDN25C9JDP6 229 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 PPIAL4DF5H284 164 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 LYNX1G3V0Z9 82 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 RAB27BO00194 218 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 SH2D1BO14796 132 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 GEMIN2O14893 280 aaKnown RBP11.41□□□□□ -0.58
PRPF18-201ENST00000320054 XRCC3O43542 346 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 NDUFS7O75251 213 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 LY6HO94772 140 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 IGHV4-39P01824 125 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 PPIAL4FP0DN26 164 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 CD80P33681 288 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 TALDO1P37837 337 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 MNDAP41218 407 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 VEGFCP49767 419 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 TMEM33P57088 247 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 GMFBP60983 142 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 LSAMPQ13449 338 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 TAF9Q16594 264 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 MICBQ29980 383 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 CNIH2Q6PI25 160 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 METAP1DQ6UB28 335 aaPredicted RBP11.41□□□□□ -0.58
PRPF18-201ENST00000320054 BAIAP2L2Q6UXY1 529 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 CCDC190Q86UF4 302 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 BOLLQ8N9W6 283 aaKnown RBP11.41□□□□□ -0.58
PRPF18-201ENST00000320054 OR4M1Q8NGD0 313 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 OR10R2Q8NGX6 335 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 NRGNQ92686 78 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 DIRAS2Q96HU8 199 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 NICN1Q9BSH3 213 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 BEX4Q9NWD9 120 aaPredicted RBP11.41□□□□□ -0.58
PRPF18-201ENST00000320054 IL36RNQ9UBH0 155 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 EXTL2Q9UBQ6 330 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 DNAJB11Q9UBS4 358 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 WIPI2Q9Y4P8 454 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 PPIAL4AQ9Y536 164 aa11.41□□□□□ -0.58
PRPF18-201ENST00000320054 POLQO75417 2590 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 OR2AT4A6NND4 320 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 SOCS1O15524 211 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 GLAP06280 429 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 PSG2P11465 335 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 CDK2P24941 298 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 LMO1P25800 156 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 PTBP1P26599 531 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF18-201ENST00000320054 BLVRBP30043 206 aaPredicted RBP11.4□□□□□ -0.58
PRPF18-201ENST00000320054 NR4A2P43354 598 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 PTH2RP49190 550 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 ARL6IP1Q15041 203 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 KCNJ8Q15842 424 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 SPANXN2Q5MJ10 180 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 FAM201AQ5SY85 155 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 STUMQ69YW2 141 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 SIGIRRQ6IA17 410 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 Q6P435 159 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 PEG10Q86TG7 708 aaKnown RBP11.4□□□□□ -0.58
PRPF18-201ENST00000320054 CHST4Q8NCG5 386 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 S100ZQ8WXG8 99 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 MBD6Q96DN6 1003 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 SEH1LQ96EE3 360 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 SOSTQ9BQB4 213 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 DNTTIP1Q9H147 329 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 SPACA1Q9HBV2 294 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF18-201ENST00000320054 RCC2Q9P258 522 aaKnown RBP11.4□□□□□ -0.58
PRPF18-201ENST00000320054 ZNF222Q9UK12 451 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 HSF4Q9ULV5 492 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
PRPF18-201ENST00000320054 ITPR2Q14571 2701 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 IGHV3OR15-7A0A075B7D8 119 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 DEGS1O15121 323 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 NDUFA2O43678 99 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 PDCD6O75340 191 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 OR7C1O76099 320 aaPredicted RBP11.39□□□□□ -0.59
PRPF18-201ENST00000320054 HAND1O96004 215 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 FUT3P21217 361 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 GABRR1P24046 479 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 DNASE1P24855 282 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 GIFP27352 417 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 CHATP28329 748 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 PRDX2P32119 198 aa11.39□□□□□ -0.59
PRPF18-201ENST00000320054 RBMXP38159 391 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms