RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RTBDNQ9BSG5 229 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 TAF9BQ9HBM6 251 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 CRLF2Q9HC73 371 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 MEMO1Q9Y316 297 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 FIGNL2A6NMB9 653 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 FTCDNL1E5RQL4 147 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 SYT7O43581 403 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 LRP3O75074 770 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 YIF1AO95070 293 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 CST4P01036 141 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 GAPDHP04406 335 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 HIST1H1DP16402 221 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 ADH6P28332 368 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 APOBEC1P41238 236 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 EIF3IQ13347 325 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 SLC9A3R2Q15599 337 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 ANKRD55Q3KP44 614 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 TMEM176BQ3YBM2 270 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 AWAT1Q58HT5 328 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 TMEM268Q5VZI3 342 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 SNIP1Q8TAD8 396 aaKnown RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 PSMF1Q92530 271 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 CPNE2Q96FN4 548 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 OR10C1Q96KK4 312 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 C5orf34Q96MH7 638 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 KCNK17Q96T54 332 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 EMC6Q9BV81 110 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 PBOV1Q9GZY1 135 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 OR2S2Q9NQN1 319 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 MED29Q9NX70 200 aa9.02□□□□□ -0.97
APOBEC3F-201ENST00000308521 DNAJC13O75165 2243 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 A0A0A6YYD4 124 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 OR5H15A6NDH6 313 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 OR5H1A6NKK0 313 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF724A8MTY0 619 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 MS4A18H0YCH9 400 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 DVL1O14640 695 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 IGHEP01854 428 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF93P35789 620 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 NPY4RP50391 375 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 DAP3P51398 398 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 MYBPHQ13203 477 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 RAB32Q13637 225 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 HAGHQ16775 308 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 MS4A18Q3C1V0 323 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 KLHL24Q6TFL4 600 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 LINC00696Q6ZRV3 163 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 VASH2Q86V25 355 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 LINC00346Q8IVM7 164 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 BHLHE23Q8NDY6 225 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 CCDC54Q8NEL0 328 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 KCNG3Q8TAE7 436 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 RNASEH2CQ8TDP1 164 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 BSCL2Q96G97 398 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 YPEL4Q96NS1 127 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 RGCCQ9H4X1 137 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 PLA2G3Q9NZ20 509 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 DOK5Q9P104 306 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 OSGIN2Q9Y236 505 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 PHF3Q92576 2039 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 hCG_1809904A0A1W2PP81 198 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 A0A1W2PR64 198 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 A0A1W2PRV1 198 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 C3orf80F5H4A9 247 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 RAMP1O60894 148 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 RFPL3SP0C7P2 107 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 TLE3Q04726 772 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 PLAC9Q5JTB6 97 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 DCAF10Q5QP82 559 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 RPL7L1Q6DKI1 246 aaKnown RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF610Q8N9Z0 462 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 OR5H2Q8NGV7 314 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 C1orf147Q96MC9 270 aaPredicted RBP9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 NICN1Q9BSH3 213 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 CENPMQ9NSP4 180 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF407Q9C0G0 2248 aa9.01□□□□□ -0.97
APOBEC3F-201ENST00000308521 CACNA1GO43497 2377 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF814B7Z6K7 855 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 NPIPA5E9PKD4 350 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 GABRR1P24046 479 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 POU3F1Q03052 451 aaPredicted RBP9□□□□□ -0.97
APOBEC3F-201ENST00000308521 RAET1LQ5VY80 246 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 GLIPR1L1Q6UWM5 242 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF101Q8IZC7 436 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 OR13C9Q8NGT0 318 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 DDIT4LQ96D03 193 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 SLAMF6Q96DU3 332 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 POM121Q96HA1 1249 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZNF385AQ96PM9 386 aaKnown RBP9□□□□□ -0.97
APOBEC3F-201ENST00000308521 HES7Q9BYE0 225 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 MOB1AQ9H8S9 216 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9□□□□□ -0.97
APOBEC3F-201ENST00000308521 ZDHHC8Q9ULC8 765 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 NPIPA1Q9UND3 350 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 GAB2Q9UQC2 676 aa9□□□□□ -0.97
APOBEC3F-201ENST00000308521 MRPS28Q9Y2Q9 187 aaKnown RBP9□□□□□ -0.97
APOBEC3F-201ENST00000308521 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms