RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 IRF2P14316 349 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 DUSP8Q13202 625 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 RAB32Q13637 225 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 ZNF664Q8N3J9 261 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 TMEM229BQ8NBD8 167 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 EID2BQ96D98 161 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BLQ99880 126 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 SEPSECSQ9HD40 501 aaKnown RBP13.63□□□□□ -0.23
LEMD3-201ENST00000308330 OR5AC2Q9NZP5 309 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 PPIL1Q9Y3C6 166 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 PF4V1P10720 104 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 PPP1R1AQ13522 171 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 CPT1CQ8TCG5 803 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 B3GALT5Q9Y2C3 310 aa13.63□□□□□ -0.23
LEMD3-201ENST00000308330 NKX6-3A6NJ46 265 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 CD300LBA8K4G0 201 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 J3KRW8 73 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 FGF17O60258 216 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 DBHP09172 617 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PRICKLE2Q7Z3G6 844 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 NTNG2Q96CW9 530 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 DIRC2Q96SL1 478 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 ULBP2Q9BZM5 246 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PRSS50Q9UI38 385 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 ZNF107Q9UII5 783 aaPredicted RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 NRASP01111 189 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HRASP01112 189 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 KRASP01116 189 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 ELLP55199 621 aaPredicted RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 ZXDAP98168 799 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 IL24Q13007 206 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 MFSD12Q6NUT3 480 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 MYPOPQ86VE0 399 aaPredicted RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 MARCH1Q8TCQ1 289 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PARLQ9H300 379 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 SLC25A19Q9HC21 320 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BKO60814 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 OR2A4O95047 310 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BJP06899 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BOP23527 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 DUSP1P28562 367 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BBP33778 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 WNT3P56703 355 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BDP58876 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BCP62807 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PMCHL1Q16048 86 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST2H2BEQ16778 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PLXDC2Q6UX71 529 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TUSC5Q8IXB3 177 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TMEM99Q8N816 258 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 SHROOM3Q8TF72 1996 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BHQ93079 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PINX1Q96BK5 328 aaKnown RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 OR2A7Q96R45 310 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BNQ99877 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 HIST1H2BMQ99879 126 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 WDR13Q9H1Z4 485 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 PATE3B3GLJ2 98 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TOX3O15405 576 aaPredicted RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 ZNF253O75346 499 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 F13BP05160 661 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TEAD1P28347 426 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 FAM53BQ14153 422 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TMEM128Q5BJH2 165 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 C8orf82Q6P1X6 216 aaPredicted RBP13.62□□□□□ -0.23
LEMD3-201ENST00000308330 OLIG3Q7RTU3 272 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 GPBAR1Q8TDU6 330 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 FAM173AQ9BQD7 235 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TRAPPC2LQ9UL33 140 aa13.62□□□□□ -0.23
LEMD3-201ENST00000308330 TMEM269A0A1B0GVZ9 245 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 NRG2O14511 850 aaPredicted RBP13.61□□□□□ -0.23
LEMD3-201ENST00000308330 CD160O95971 181 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 SBK3P0C264 359 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 EDARADDQ8WWZ3 215 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 RCC1LQ96I51 464 aaKnown RBP13.61□□□□□ -0.23
LEMD3-201ENST00000308330 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
LEMD3-201ENST00000308330 P4HTMQ9NXG6 502 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
LEMD3-201ENST00000308330 LOC102723971A0A1B0GUV8 181 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 ARRDC5A6NEK1 342 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 H0YIG0 161 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 APLNRP35414 380 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 GUCA2AQ02747 115 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 SSPNQ14714 243 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 ADGRE4PQ86SQ3 457 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 C1QTNF3Q9BXJ4 246 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 RAB18Q9NP72 206 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 TRAV27A0A087WT01 109 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 C9orf170A2RU37 121 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 ADRA2CP18825 462 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 EMP1P54849 157 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 TMEM33P57088 247 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 CRMP1Q14194 572 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 BRICD5Q6PL45 260 aa13.61□□□□□ -0.23
LEMD3-201ENST00000308330 SUMF1Q8NBK3 374 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms