RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 PRSS3P2Q8NHM4 247 aa15.39■□□□□ 0.06
SYNPO-201ENST00000307662 UBALD1Q8TB05 177 aa15.39■□□□□ 0.06
SYNPO-201ENST00000307662 CA5BP1Q8WTZ4 195 aa15.39■□□□□ 0.06
SYNPO-201ENST00000307662 MRPS18AQ9NVS2 196 aaKnown RBP15.39■□□□□ 0.06
SYNPO-201ENST00000307662 LILRA5A6NI73 299 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 ALG1L2C9J202 215 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 METAP1P53582 386 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 COX19Q49B96 90 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 ZADH2Q8N4Q0 377 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 SLC2A8Q9NY64 477 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 M0R2Z0 102 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 GZMMP51124 257 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 ETV3LQ6ZN32 361 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 NPEPL1Q8NDH3 523 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 PCDHGA9Q9Y5G4 932 aaKnown RBP15.39■□□□□ 0.05
SYNPO-201ENST00000307662 CTSVO60911 334 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 HTR1DP28221 377 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 UBE2V2Q15819 145 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 HLA-DRB5Q30154 266 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 OR2M7Q8NG81 312 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 OR10G8Q8NGN5 311 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 A0A1W2PPC4 97 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 MPZL1O95297 269 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 NSUN5P2Q63ZY6 315 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 TBC1D26Q86UD7 250 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 OR2T6Q8NHC8 308 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 TIMD4Q96H15 378 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 FUT9Q9Y231 359 aa15.39■□□□□ 0.05
SYNPO-201ENST00000307662 FCGR3BO75015 233 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 RGP1Q92546 391 aaPredicted RBP15.38■□□□□ 0.05
SYNPO-201ENST00000307662 BMP5P22003 454 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 DPPA3Q6W0C5 159 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 OR5AU1Q8NGC0 362 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 OR5D13Q8NGL4 314 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 SLC2A9Q9NRM0 540 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 OR5H15A6NDH6 313 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 OR5H1A6NKK0 313 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 M0R1B8 84 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 ZNF253O75346 499 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 NMBP08949 121 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 SEC11BP0C7V7 166 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 ZIC1Q15915 447 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 FAM74A3Q4VXF1 159 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 TMEM56Q96MV1 263 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 GHITMQ9H3K2 345 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 LAMB2P55268 1798 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 SOCS1O15524 211 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 FGF2P09038 288 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 IFITM2Q01629 132 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 MPV17LQ2QL34 196 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 TMEM196Q5HYL7 178 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 OR2A5Q96R48 311 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 STARD10Q9Y365 291 aa15.38■□□□□ 0.05
SYNPO-201ENST00000307662 C11orf94C9JXX5 98 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 ADAD2Q8NCV1 583 aaKnown RBP15.37■□□□□ 0.05
SYNPO-201ENST00000307662 TMEM191AQ9H0A3 160 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 ALX4Q9H161 411 aaPredicted RBP15.37■□□□□ 0.05
SYNPO-201ENST00000307662 MTCH2Q9Y6C9 303 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 SYNGR2O43760 224 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 MESTQ5EB52 335 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 MRPL24Q96A35 216 aaKnown RBP15.37■□□□□ 0.05
SYNPO-201ENST00000307662 ESRP2Q9H6T0 727 aaKnown RBP15.37■□□□□ 0.05
SYNPO-201ENST00000307662 AAMDCQ9H7C9 122 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 LRRC3CA6NJW4 275 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 ZXDAP98168 799 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 TSPO2Q5TGU0 170 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 ZNF774Q6NX45 483 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 OR4C45A6NMZ5 311 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 NPIPB8E9PQR5 432 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 SULT1A2P50226 295 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 EWSR1Q01844 656 aaKnown RBP eCLIP15.37■□□□□ 0.05
SYNPO-201ENST00000307662 OR10AD1Q8NGE0 317 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 OR8B12Q8NGG6 310 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
SYNPO-201ENST00000307662 CHST1O43916 411 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 VMA21Q3ZAQ7 101 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 PRSS41Q7RTY9 318 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 PHF7Q9BWX1 381 aaPredicted RBP15.36■□□□□ 0.05
SYNPO-201ENST00000307662 SH2D2AQ9NP31 389 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 IL17BQ9UHF5 180 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 ICAM5Q9UMF0 924 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 ATP23Q9Y6H3 246 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 SLC22A20A6NK97 555 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 DHRS11Q6UWP2 260 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 NRIP2Q9BQI9 281 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 FLRT3Q9NZU0 649 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 RNF24Q9Y225 148 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 NTN1O95631 604 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 F12P00748 615 aaPredicted RBP15.36■□□□□ 0.05
SYNPO-201ENST00000307662 MICBQ29980 383 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 ABLIM2Q6H8Q1 611 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 OIT3Q8WWZ8 545 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 PSG11Q9UQ72 335 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 HEXAP06865 529 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 CT62P0C5K7 136 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 NAAAQ02083 359 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 ALG14Q96F25 216 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 WDR13Q9H1Z4 485 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 OR2D2Q9H210 308 aa15.36■□□□□ 0.05
SYNPO-201ENST00000307662 SPTY2D1-AS1A0A0U1RR47 76 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms