RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CCL17Q92583 94 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 FAHD2AQ96GK7 314 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 KCNK15Q9H427 330 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 SCN10AQ9Y5Y9 1956 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 OR5AC1P0C628 307 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 ZNF17P17021 662 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 CD82P27701 267 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 CNN1P51911 297 aaKnown RBP14.07□□□□□ -0.16
USP42-201ENST00000306177 HLXQ14774 488 aaPredicted RBP14.07□□□□□ -0.16
USP42-201ENST00000306177 CASP8AP2Q9UKL3 1982 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 IGKV1-8A0A0C4DH67 115 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 RNASEK-C17orf49H0YIS7 233 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
USP42-201ENST00000306177 RPEQ96AT9 228 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 CYB5R1Q9UHQ9 305 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 V9GYH0 126 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 FBP1P09467 338 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 ERGP11308 486 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 LIFP15018 202 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 SLC38A11Q08AI6 406 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 IL13RA2Q14627 380 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 MIDNQ504T8 468 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 ZBTB44Q8NCP5 570 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 MOB3AQ96BX8 217 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 RNF24Q9Y225 148 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 NCBP2LA6PVI3 153 aaKnown RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 G3V3Q6 166 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 DNPH1O43598 174 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 FGF2P09038 288 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 OR3A1P47881 315 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 SURF2Q15527 256 aaPredicted RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 PDZD11Q5EBL8 140 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 PRSS54Q6PEW0 395 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 RNF133Q8WVZ7 376 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 CTSDP07339 412 aaPredicted RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 ACAA2P42765 397 aaKnown RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 OR5C1Q8NGR4 320 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 OR10AC1Q8NH08 325 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 OR2T6Q8NHC8 308 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 SLC52A3Q9NQ40 469 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 OR6C3Q9NZP0 311 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 CACNG5Q9UF02 275 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 PRSS12P56730 875 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 MRGPRDQ8TDS7 321 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 NEIL1Q96FI4 390 aaPredicted RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 AKR1E2Q96JD6 320 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 OR2H1Q9GZK4 316 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 CTDSP1Q9GZU7 261 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 ANXA10Q9UJ72 324 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 SFTA3P0C7M3 94 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 COL19A1Q14993 1142 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 GUK1Q16774 197 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 ZNF501Q96CX3 271 aaPredicted RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 LSM2Q9Y333 95 aaKnown RBP14.06□□□□□ -0.16
USP42-201ENST00000306177 MIA3Q5JRA6 1907 aa14.06□□□□□ -0.16
USP42-201ENST00000306177 ASCL1P50553 236 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 LSM11P83369 360 aaKnown RBP eCLIP14.05□□□□□ -0.16
USP42-201ENST00000306177 C3AR1Q16581 482 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 OR6S1Q8NH40 331 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
USP42-201ENST00000306177 WDR13Q9H1Z4 485 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 GPR35Q9HC97 309 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 MMP26Q9NRE1 261 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 UNC13CQ8NB66 2214 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 SCN3AQ9NY46 2000 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 PNPP00491 289 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 RPS4Y2Q8TD47 263 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 MAP6Q96JE9 813 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 GPA33Q99795 319 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 ZNF71Q9NQZ8 489 aaPredicted RBP14.05□□□□□ -0.16
USP42-201ENST00000306177 SIPA1L1O43166 1804 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 IGHV3-43A0A0B4J1X8 118 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 C3orf80F5H4A9 247 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 PPIHO43447 177 aaKnown RBP14.05□□□□□ -0.16
USP42-201ENST00000306177 IGHV3-43DP0DP04 118 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 MLF1P58340 268 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 PRR27Q6MZM9 219 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 ZDHHC16Q969W1 377 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 MRPS18AQ9NVS2 196 aaKnown RBP14.05□□□□□ -0.16
USP42-201ENST00000306177 FKBP11Q9NYL4 201 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 SPTA1P02549 2419 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 A0A1W2PPQ1 181 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 CPN1P15169 458 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 DCAF10Q5QP82 559 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 OR2C3Q8N628 320 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
USP42-201ENST00000306177 SERTM2A0A1B0GWG4 89 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 MEX3AA1L020 520 aaKnown RBP14.04□□□□□ -0.16
USP42-201ENST00000306177 M0QZ24 198 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 PTP4A3O75365 173 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 MPGP29372 298 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 FFAR4Q5NUL3 377 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 TMEM88Q6PEY1 159 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 ASB5Q8WWX0 329 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 LRFN3Q9BTN0 628 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 STARD10Q9Y365 291 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 CENPVL1A0A0U1RR11 272 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 FABP9Q0Z7S8 132 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms