RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 BCL3P20749 454 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 NPBWR2P48146 333 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 EDDM3BP56851 147 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 HCP5Q6MZN7 132 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 TMPRSS11AQ6ZMR5 421 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 GDPGP1Q6ZNW5 385 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 CNIH3Q8TBE1 160 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 RHOFQ9HBH0 211 aa21.59■■□□□ 1.05
CDKN2A-201ENST00000304494 SPRY1O43609 319 aaPredicted RBP21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 ALX3O95076 343 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 CLIC3O95833 236 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 PIPP12273 146 aaPredicted RBP21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 CCL3L1P16619 93 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 PRKACAP17612 351 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 PEX2P28328 305 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 ERVFRD-1P60508 538 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 ZNF273Q14593 569 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 ZNF146Q15072 292 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 CCDC58Q4VC31 144 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 DHRSXQ8N5I4 330 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 C11orf42Q8N5U0 333 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 PARP16Q8N5Y8 322 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 ZSCAN4Q8NAM6 433 aaPredicted RBP21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 TSEN15Q8WW01 171 aaKnown RBP21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 RFT1Q96AA3 541 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 PDCD1LG2Q9BQ51 273 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 SLITRK2Q9H156 845 aa21.58■■□□□ 1.05
CDKN2A-201ENST00000304494 SULT1B1O43704 296 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 MEF2CQ06413 473 aaPredicted RBP21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 IL18R1Q13478 541 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 SAXO1Q8IYX7 474 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 OR5R1Q8NH85 324 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 IL36RNQ9UBH0 155 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 VPREB3Q9UKI3 123 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 PCDHGB5Q9Y5G0 923 aa21.57■■□□□ 1.04
CDKN2A-201ENST00000304494 RBP4P02753 201 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 HCKP08631 526 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 MYL12AP19105 171 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 GABRR1P24046 479 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 MED21Q13503 144 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 TAF9Q16594 264 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 RPL22L1Q6P5R6 122 aaKnown RBP21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 C17orf107Q6ZR85 190 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 BEND2Q8NDZ0 799 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 PPP1R35Q8TAP8 253 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 SPACA5Q96QH8 159 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 HMG20AQ9NP66 347 aa21.56■■□□□ 1.04
CDKN2A-201ENST00000304494 TMEM82A0PJX8 343 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 C17orf98A8MV24 154 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 KDM4BO94953 1096 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 ETV1P50549 477 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 GTF2A1P52655 376 aaPredicted RBP21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 ADARB1P78563 741 aaKnown RBP21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 RELBQ01201 579 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 EDDM3AQ14507 147 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 GRK1Q15835 563 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 OR5D18Q8NGL1 313 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 CPNE2Q96FN4 548 aaPredicted RBP21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 DIMT1Q9UNQ2 313 aaKnown RBP21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 EXOSC1Q9Y3B2 195 aaKnown RBP21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 HSPE1-MOB4S4R3N1 261 aa21.55■■□□□ 1.04
CDKN2A-201ENST00000304494 IGKV1-12A0A0C4DH73 117 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 hADV38S2A0JD32 116 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 SH2D1BO14796 132 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 IGKV1D-12P01611 117 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 ZNF728P0DKX0 622 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 DUSP1P28562 367 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 DLX6P56179 175 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 LGALS4P56470 323 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 CDK5R1Q15078 307 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 KISS1Q15726 138 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 EXOSC4Q9NPD3 245 aaKnown RBP21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 CHCHD3Q9NX63 227 aaKnown RBP21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 GSTK1Q9Y2Q3 226 aa21.54■■□□□ 1.04
CDKN2A-201ENST00000304494 CLPSL1A2RUU4 121 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 MGST3O14880 152 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 MAGEB3O15480 346 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 CALCBP10092 127 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 COX7A1P24310 79 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 SNU13P55769 128 aaKnown RBP21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 OLFML2AQ68BL7 652 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 GPR148Q8TDV2 347 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 TMEM80Q96HE8 168 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 ZNF714Q96N38 554 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 CHST6Q9GZX3 395 aa21.53■■□□□ 1.04
CDKN2A-201ENST00000304494 PSPNO60542 156 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 CD2P06729 351 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 TMEM225BP0DP42 221 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 RAB3AP20336 220 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 OGFRL1Q5TC84 451 aaPredicted RBP21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 OR2G6Q5TZ20 316 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 DHRS7BQ6IAN0 325 aaPredicted RBP21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 ZNF782Q6ZMW2 699 aaPredicted RBP21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 OR52N4Q8NGI2 321 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 OR13D1Q8NGV5 346 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 RPS4Y2Q8TD47 263 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 MEGF9Q9H1U4 602 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 BABAM2Q9NXR7 383 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 LINC00312Q9Y6C7 94 aa21.52■■□□□ 1.04
CDKN2A-201ENST00000304494 CASQ2O14958 399 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms