RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZNF35P13682 527 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 AKR1C4P17516 323 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 TUBG1P23258 451 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 VAMP1P23763 118 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 MPV17P39210 176 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 MECP2P51608 486 aaKnown RBP12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 CASP6P55212 293 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 VAX1Q5SQQ9 334 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 ZDHHC22Q8N966 263 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 DYRK2Q92630 601 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 ZNF436Q9C0F3 470 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 RANBP3Q9H6Z4 567 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 TUBG2Q9NRH3 451 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 J3QT63 122 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 DUSP1P28562 367 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 NPY4RP50391 375 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 RGS7BPQ6MZT1 257 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 SLC36A1Q7Z2H8 476 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 MARCH1Q8TCQ1 289 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 ZNF431Q8TF32 576 aaPredicted RBP12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 ZNF488Q96MN9 340 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 PURGQ9UJV8 347 aaKnown RBP12.41□□□□□ -0.42
SHCBP1-201ENST00000303383 A6NLC8 198 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 HSPB6O14558 160 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 TSPAN9O75954 239 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 HLA-AP01891 365 aaKnown RBP12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 UBE2MP61081 183 aaKnown RBP12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM27E3Q08E93 113 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ARL6IP6Q8N6S5 226 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 MARS2Q96GW9 593 aaKnown RBP12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 HYLS1Q96M11 299 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 PKIBQ9C010 78 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ZNF286AQ9HBT8 521 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 DUSP13Q9UII6 198 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 MEIKINA0A087WXM9 373 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 LRP5LA4QPB2 252 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A10PA6NDY2 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A18PA6NE21 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A16PA6NEW6 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A20PA6NIJ5 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A8PA6NJQ4 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A7PA6NKC0 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A22PA8MWA6 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A12PA8MX19 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A5PA8MXJ8 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A23PA8MXZ1 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 MCRIP1C9JLW8 97 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 IGLV1-44P01699 117 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A15PP0C7V4 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A13PP0C7W8 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A14PP0C7W9 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM90A24PP0C7X0 464 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 PGAM2P15259 253 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ID4P47928 161 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 NAAAQ02083 359 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 IL24Q13007 206 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ELP2Q6IA86 826 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 FAM58AQ8N1B3 248 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 MUC20Q8N307 709 aaPredicted RBP12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 POM121Q96HA1 1249 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 C12orf4Q9NQ89 552 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ANAPC10Q9UM13 185 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 VSIG4Q9Y279 399 aa12.4□□□□□ -0.42
SHCBP1-201ENST00000303383 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 A8MXE2 369 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 PRSS44E7EML9 344 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 DTYMKP23919 212 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 CALCRP30988 508 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 CDK10Q15131 360 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 MPV17LQ2QL34 196 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 C12orf45Q8N5I9 185 aaPredicted RBP12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 OR8G5Q8NG78 346 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 OR2T35Q8NGX2 323 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 OR2AT4A6NND4 320 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 ZNF44P15621 663 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 MPZP25189 248 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 GZMKP49863 264 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 VHLLQ6RSH7 139 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 FAM169BQ8N8A8 192 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 CASTOR1Q8WTX7 329 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 OR51I2Q9H344 312 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 SPACA1Q9HBV2 294 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 Q9UFV3 132 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 ANXA10Q9UJ72 324 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 TUBD1Q9UJT1 453 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 ESPL1Q14674 2120 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 F8VVB4 439 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 F8VWA3 439 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 GOSR2O14653 212 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 FCGR3AP08637 254 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 DNASE1P24855 282 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 TAS2R31P59538 309 aa12.39□□□□□ -0.43
SHCBP1-201ENST00000303383 IL13RA1P78552 427 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms