RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 RPL7P18124 248 aaKnown RBP6.87□□□□□ -1.31
SCN9A-201ENST00000303354 BRS3P32247 399 aa6.87□□□□□ -1.31
SCN9A-201ENST00000303354 CAMPP49913 170 aa6.87□□□□□ -1.31
SCN9A-201ENST00000303354 FUT7Q11130 342 aa6.87□□□□□ -1.31
SCN9A-201ENST00000303354 WDR74Q6RFH5 385 aaPredicted RBP6.87□□□□□ -1.31
SCN9A-201ENST00000303354 GPHA2Q96T91 129 aa6.87□□□□□ -1.31
SCN9A-201ENST00000303354 ARHGDIGQ99819 225 aa6.87□□□□□ -1.31
SCN9A-201ENST00000303354 LNP1A1A4G5 178 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 NEURL1O76050 574 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 NKX2-2O95096 273 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 CEACAM3P40198 252 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 TCL1AP56279 114 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 TMEM105Q8N8V8 129 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 BCL2L2Q92843 193 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SLC25A46Q96AG3 418 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 C3orf85A0A1B0GTC6 90 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 A0A1W2PNV4 684 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 S100A11P31949 105 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SLC25A53Q5H9E4 307 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 OR4D11Q8NGI4 311 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 LURAP1Q96LR2 239 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 WDR13Q9H1Z4 485 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 VSIG4Q9Y279 399 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 KLK4Q9Y5K2 254 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ASPDHA6ND91 283 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 TIAF1O95411 115 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ZNF26P17031 533 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 PCOLCEQ15113 449 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ACSF3Q4G176 576 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 JMJD6Q6NYC1 403 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 OR4B1Q8NGF8 309 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 COX14Q96I36 57 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 EVPLQ92817 2033 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 DHRS3O75911 302 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ORM1P02763 201 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SMIM19Q96E16 107 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 C21orf140B9A014 251 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SMPD2O60906 423 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SFTPCP11686 197 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 HLA-GP17693 338 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ZNF239Q16600 458 aaKnown RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 MESTQ5EB52 335 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 CACNG5Q9UF02 275 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 A0A0B4J2E0 115 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 A0A1B0GX12 115 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 CDC42EP2O14613 210 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 OR5AC1P0C628 307 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 LINC00303Q3SY05 128 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 RFLNBQ8N5W9 214 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 OR5D13Q8NGL4 314 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 NDUFB11Q9NX14 153 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SERPINE3A8MV23 424 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 CLDN14O95500 239 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SPP1P10451 314 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 AMTP48728 403 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 FAM27E3Q08E93 113 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ST3GAL2Q16842 350 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SLC35E4Q6ICL7 350 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 LYSMD2Q8IV50 215 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SLC38A6Q8IZM9 456 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 FAM222BQ8WU58 562 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 ITLN1Q8WWA0 313 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 PTP4A1Q93096 173 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SNX22Q96L94 193 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 AKIRIN1Q9H9L7 192 aaPredicted RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 LOC389332A0A1B0GUA5 103 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 TPBGQ13641 420 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 MRM1Q6IN84 353 aaKnown RBP6.86□□□□□ -1.31
SCN9A-201ENST00000303354 HCP5Q6MZN7 132 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 SIGLEC7Q9Y286 467 aa6.86□□□□□ -1.31
SCN9A-201ENST00000303354 TIAM2Q8IVF5 1701 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 UMAD1C9J7I0 102 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 BMPR1BO00238 502 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 RPL34P49207 117 aaKnown RBP6.85□□□□□ -1.31
SCN9A-201ENST00000303354 ISL1P61371 349 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 CALHM3Q86XJ0 350 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 PIMREGQ9BSJ6 248 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 AURKAIP1Q9NWT8 199 aaPredicted RBP6.85□□□□□ -1.31
SCN9A-201ENST00000303354 LRP5O75197 1615 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 ADAMTSL1Q8N6G6 1762 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 FFAR1O14842 300 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 MRPS14O60783 128 aaKnown RBP6.85□□□□□ -1.31
SCN9A-201ENST00000303354 RHBDL1O75783 438 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 VDAC1P21796 283 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 HSD17B13Q7Z5P4 300 aaPredicted RBP6.85□□□□□ -1.31
SCN9A-201ENST00000303354 GPX8Q8TED1 209 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 OR2V2Q96R30 315 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 SRRQ9GZT4 340 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 PLAUP00749 431 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 OXA1LQ15070 435 aa6.85□□□□□ -1.31
SCN9A-201ENST00000303354 BAK1Q16611 211 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms