RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 OPRK1P41145 380 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 PMP22Q01453 160 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 ANKRD34AQ69YU3 496 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 DMKNQ6E0U4 476 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TRA2AQ13595 282 aaKnown RBP eCLIP6.81□□□□□ -1.322e-22■□□□□ 9
SF3B3-201ENST00000302516 HMGCLL1Q8TB92 370 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 NUDT8Q8WV74 236 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 ASB10Q8WXI3 467 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 LINC00052Q96N35 136 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 THYN1Q9P016 225 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 LCTP09848 1927 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CXorf65A6NEN9 183 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CDS2O95674 445 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CXorf1O96002 111 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 LIMK1P53667 647 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SLC37A1P57057 533 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 RIGQ13278 110 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 RAB32Q13637 225 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 KLF9Q13886 244 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SPPL3Q8TCT6 385 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 RLN3Q8WXF3 142 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SH3BGRL2Q9UJC5 107 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 A0A1W2PNR3 127 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF117Q03924 483 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SMAGPQ0VAQ4 97 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 FAM219AQ8IW50 185 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 PRSS3P2Q8NHM4 247 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MOB3AQ96BX8 217 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ABHD14BQ96IU4 210 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 TXNDC17Q9BRA2 123 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 IL21Q9HBE4 155 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 GLRX2Q9NS18 164 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 A0A096LPE4 126 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 LINC01553A4QN01 128 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MMP9P14780 707 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 IRF3Q14653 427 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MRGPRGQ86SM5 289 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM38BQ9NVV0 291 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 TBX21Q9UL17 535 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ATP23Q9Y6H3 246 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MICBQ29980 383 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR6X1Q8NH79 312 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ACY3Q96HD9 319 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SLC6A13Q9NSD5 602 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 GREB1LQ9C091 1923 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ZSWIM8A7E2V4 1837 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MASP2O00187 686 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR5AL1P0C617 328 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CRISP2P16562 243 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 S100A4P26447 101 aaKnown RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SELENOPP49908 381 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 BSXQ3C1V8 233 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 TRIM61Q5EBN2 209 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM65Q6PI78 240 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR5AU1Q8NGC0 362 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 PECRQ9BY49 303 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ASXL3Q9C0F0 2248 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CABIN1Q9Y6J0 2220 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 TSC2P49815 1807 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OOEPA6NGQ2 149 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 PLPP3O14495 311 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 PRRX1P54821 245 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 DHRS7BQ6IAN0 325 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR2M3Q8NG83 312 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 C6orf106Q9H6K1 298 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 SHANK3Q9BYB0 1731 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MS4A18H0YCH9 400 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 GYPAP02724 150 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 DYNLT3P51808 116 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MS4A18Q3C1V0 323 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF770Q6IQ21 691 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ZBTB34Q8NCN2 500 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR10G8Q8NGN5 311 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR6C3Q9NZP0 311 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR1A1Q9P1Q5 309 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 PRSS50Q9UI38 385 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 A0A1B0GTQ1 180 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 FAM221AA4D161 298 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CRYABP02511 175 aaKnown RBP6.8□□□□□ -1.32
SF3B3-201ENST00000302516 CEACAM5P06731 702 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 NAT2P11245 290 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 OR5M9Q8NGP3 310 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 MRGPRX1Q96LB2 322 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 ANXA10Q9UJ72 324 aa6.8□□□□□ -1.32
SF3B3-201ENST00000302516 LRRC37AA6NMS7 1700 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 A0A1W2PQD3 144 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 GAPDHP04406 335 aaKnown RBP6.79□□□□□ -1.32
SF3B3-201ENST00000302516 GABRA1P14867 456 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 LPAR6P43657 344 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 B4GALNT1Q00973 533 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 SSX8Q7RTT4 187 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 GMPPAQ96IJ6 420 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-201ENST00000302516 MRGPRX3Q96LB0 322 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 FOXB1Q99853 325 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 NUDT16L1Q9BRJ7 211 aaKnown RBP6.79□□□□□ -1.32
SF3B3-201ENST00000302516 DCAF16Q9NXF7 216 aa6.79□□□□□ -1.32
SF3B3-201ENST00000302516 IGHV3-20A0A0C4DH32 117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms