RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 SPRY1O43609 319 aaPredicted RBP12.69□□□□□ -0.38
UBXN1-202ENST00000301935 APOA1P02647 267 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 SNRPBP14678 240 aaKnown RBP12.69□□□□□ -0.38
UBXN1-202ENST00000301935 CLDN12P56749 244 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 QRFPP83859 136 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 CARTPTQ16568 116 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 NHLRC3Q5JS37 347 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 UBE2NLQ5JXB2 153 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 PRAMEF6Q5VXH4 476 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 WDR82Q6UXN9 313 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 C1QL2Q7Z5L3 287 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 LINC00596Q86U02 117 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 MOGAT3Q86VF5 341 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 C1orf147Q96MC9 270 aaPredicted RBP12.69□□□□□ -0.38
UBXN1-202ENST00000301935 NRIP2Q9BQI9 281 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
UBXN1-202ENST00000301935 ABCG5Q9H222 651 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 UFSP2Q9NUQ7 469 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 MTCH1Q9NZJ7 389 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 COMMD3Q9UBI1 195 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 NPTNQ9Y639 398 aa12.69□□□□□ -0.38
UBXN1-202ENST00000301935 IGHV1-69-2A0A0G2JMI3 117 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 SRRM5B3KS81 715 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 RGS5O15539 181 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 ANGPTL7O43827 346 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
UBXN1-202ENST00000301935 TPPPO94811 219 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 HTR3BO95264 441 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FSTL3O95633 263 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 PAHP00439 452 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 PLATP00750 562 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 TGFAP01135 160 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 CHRM2P08172 466 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 VSIG8P0DPA2 414 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FGF12P61328 243 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 ERVK11-1P61568 191 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 MPPED2Q15777 294 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 HFEQ30201 348 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 RNF144BQ7Z419 303 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
UBXN1-202ENST00000301935 FAM58AQ8N1B3 248 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 ZCCHC24Q8N2G6 241 aaKnown RBP12.68□□□□□ -0.38
UBXN1-202ENST00000301935 OSR2Q8N2R0 312 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 OR51T1Q8NGJ9 327 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 LGALS14Q8TCE9 139 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 RDH5Q92781 318 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 SLAMF9Q96A28 289 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 PHF21AQ96BD5 680 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 S100A16Q96FQ6 103 aaKnown RBP12.68□□□□□ -0.38
UBXN1-202ENST00000301935 TMEM59Q9BXS4 323 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
UBXN1-202ENST00000301935 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
UBXN1-202ENST00000301935 IGKV1-12A0A0C4DH73 117 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 TMEM272A0A1B0GTI8 110 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 SYNGR1O43759 233 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 CDC14BO60729 498 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 NXPH2O95156 264 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 LHBP01229 141 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 IGKV1D-12P01611 117 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 MGMTP16455 207 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 SERPINA2P20848 420 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 CPT2P23786 658 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 TALDO1P37837 337 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 CR1LQ2VPA4 569 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 SMIM21Q3B7S5 101 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 SPIN3Q5JUX0 258 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 C15orf40Q8WUR7 153 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 LRRC29Q8WV35 223 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 WDFY2Q96P53 400 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 NUDT16L1Q9BRJ7 211 aaKnown RBP12.67□□□□□ -0.38
UBXN1-202ENST00000301935 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 HES4Q9HCC6 221 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 HMG20AQ9NP66 347 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 DIABLOQ9NR28 239 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 RHBDL2Q9NX52 303 aa12.67□□□□□ -0.38
UBXN1-202ENST00000301935 CTDSP2O14595 271 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 RHBDL1O75783 438 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 MPIG6BO95866 241 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 SFTPBP07988 381 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 BCL3P20749 454 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 GLRA1P23415 457 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 RPS27AP62979 156 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms