RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 GINS3Q9BRX5 216 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 SLC25A31Q9H0C2 315 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 HS3ST3B1Q9Y662 390 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 IGKV1-9A0A0C4DH69 117 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 NPIPB7O75200 414 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 MMP9P14780 707 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 CD200P41217 278 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 CASP6P55212 293 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 IL15RAQ13261 267 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 IL13RA2Q14627 380 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 MPV17LQ2QL34 196 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 UNQ6494/PRO21346Q6UXR6 183 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 SCGB1C1Q8TD33 95 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 CA14Q9ULX7 337 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 MMACHCQ9Y4U1 282 aa9.99□□□□□ -0.81
TRUB1-201ENST00000298746 NKX2-6A6NCS4 301 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 ARGFXA6NJG6 315 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 HSPB6O14558 160 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 CLPSP04118 112 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 TNFRSF4P43489 277 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 NKAIN1Q4KMZ8 207 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 RTL6Q6ICC9 239 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 LYPD6Q86Y78 171 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 MRPL41Q8IXM3 137 aaKnown RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 DMRTC2Q8IXT2 367 aaPredicted RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 SLC35G3Q8N808 338 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 OR10AD1Q8NGE0 317 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 OR2AE1Q8NHA4 323 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 GALNT14Q96FL9 552 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 THOC3Q96J01 351 aaKnown RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 ZNF286AQ9HBT8 521 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 TUBD1Q9UJT1 453 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 CEBPZOSA8MTT3 80 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 TERTO14746 1132 aaKnown RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 TSPAN2O60636 221 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 OR2J2O76002 312 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 SELLP14151 372 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 CAPZBP47756 277 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 KDF1Q8NAX2 398 aaPredicted RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 C5orf63A6NC05 138 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 CLDN34H7C241 214 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 MASP2O00187 686 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 LCATP04180 440 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 HOXC4P09017 264 aaPredicted RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 ZNF133P52736 654 aaPredicted RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 FGF8P55075 233 aaPredicted RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 ZNF574Q6ZN55 896 aaPredicted RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 C1QL4Q86Z23 238 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 MISP3Q96FF7 219 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 SPIN2AQ99865 258 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 SPIN2BQ9BPZ2 258 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 LANCL2Q9NS86 450 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 RBM7Q9Y580 266 aaKnown RBP9.98□□□□□ -0.81
TRUB1-201ENST00000298746 NUP210LQ5VU65 1888 aa9.98□□□□□ -0.81
TRUB1-201ENST00000298746 ZNF407Q9C0G0 2248 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 DBHP09172 617 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 DYNLT3P51808 116 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 OR8G1Q15617 311 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 HIKESHIQ53FT3 197 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 NOXO1Q8NFA2 376 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 C1orf147Q96MC9 270 aaPredicted RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 PRDM13Q9H4Q3 707 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 ALKBH4Q9NXW9 302 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 RANBP2P49792 3224 aaKnown RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 CEACAM18A8MTB9 384 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 HBE1P02100 147 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 FGF7P21781 194 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 TMEM187Q14656 261 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 HIST3H2BBQ8N257 126 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 OR1N1Q8NGS0 311 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 OBP2AQ9NY56 170 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 KIAA1456Q9P272 454 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 LAMP3Q9UQV4 416 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 IGKV3-11P04433 115 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 NR2C1P13056 603 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 CSNK1A1P48729 337 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 TAS2R60P59551 318 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 GRB2P62993 217 aaKnown RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 ZNF154Q13106 437 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 CXorf66Q5JRM2 361 aaPredicted RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 FIP1L1Q6UN15 594 aaKnown RBP9.97□□□□□ -0.81
TRUB1-201ENST00000298746 TMEM92Q6UXU6 159 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 BEND4Q6ZU67 534 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 FBXL14Q8N1E6 418 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 ST8SIA1Q92185 356 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 OR5B12Q96R08 314 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 TMEM106CQ9BVX2 250 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 GPR87Q9BY21 358 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 PLEKHF2Q9H8W4 249 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 FBLN5Q9UBX5 448 aa9.97□□□□□ -0.81
TRUB1-201ENST00000298746 SPTY2D1-AS1A0A0U1RR47 76 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 A0A1W2PQD3 144 aa9.96□□□□□ -0.81
TRUB1-201ENST00000298746 LIPT2A6NK58 231 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms