RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZIC2O95409 532 aaPredicted RBP11.88□□□□□ -0.51
HPS3-201ENST00000296051 HNF1AP20823 631 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 KIR3DL2P43630 455 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 RPL11P62913 178 aaKnown RBP11.88□□□□□ -0.51
HPS3-201ENST00000296051 KISS1Q15726 138 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 OR2AE1Q8NHA4 323 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 TMEM37Q8WXS4 190 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 FZR1Q9UM11 496 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 OSGIN2Q9Y236 505 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
HPS3-201ENST00000296051 NYNRINQ9P2P1 1898 aaKnown RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 LMX1BO60663 402 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 PNPP00491 289 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 HLA-DOBP13765 273 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 SELEP16581 610 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 SUMO3P55854 103 aaPredicted RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 LNP1A1A4G5 178 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 MEX3AA1L020 520 aaKnown RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 FGF2P09038 288 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 DEFA4P12838 97 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 FCARP24071 287 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 PMP22Q01453 160 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 BAXQ07812 192 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 MICBQ29980 383 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 CXorf67Q86X51 503 aaPredicted RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 SKA3Q8IX90 412 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 ASB13Q8WXK3 278 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 VSTM2LQ96N03 204 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 OPA3Q9H6K4 179 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 PIPOXQ9P0Z9 390 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 C17orf51A8MQB3 221 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 SIRPB1O00241 398 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 MAGEA5P43359 124 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 ZNF429Q86V71 674 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 SLC25A42Q86VD7 318 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 LHX4Q969G2 390 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 NRIP2Q9BQI9 281 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 SHARPINQ9H0F6 387 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 BCO1Q9HAY6 547 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 OR5AC2Q9NZP5 309 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 ST3GAL6Q9Y274 331 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 PPIHO43447 177 aaKnown RBP11.87□□□□□ -0.51
HPS3-201ENST00000296051 TMEM108Q6UXF1 575 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 CCL17Q92583 94 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 MARVELD3Q96A59 401 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 RAB18Q9NP72 206 aa11.87□□□□□ -0.51
HPS3-201ENST00000296051 CYR61O00622 381 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 SFTPCP11686 197 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 AADACP22760 399 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 HTD2P86397 168 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 MSMO1Q15800 293 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 SLC25A26Q70HW3 274 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 TMPRSS5Q9H3S3 457 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 LCTP09848 1927 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 VSIG8P0DPA2 414 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 FPR2P25090 351 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.86□□□□□ -0.51
HPS3-201ENST00000296051 AP4M1O00189 453 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 OR5AC1P0C628 307 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 CT45A8P0DMV1 189 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 CT45A9P0DMV2 189 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 TMEM11P17152 192 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 SRP14P37108 136 aaKnown RBP11.86□□□□□ -0.51
HPS3-201ENST00000296051 CT45A2Q5DJT8 189 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 SLC35B3Q9H1N7 401 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 CHD5Q8TDI0 1954 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 GDF9O60383 454 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 ZNF133P52736 654 aaPredicted RBP11.86□□□□□ -0.51
HPS3-201ENST00000296051 ZNF141Q15928 474 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 GAB4Q2WGN9 574 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 ATG4DQ86TL0 474 aaPredicted RBP11.86□□□□□ -0.51
HPS3-201ENST00000296051 OR2Z1Q8NG97 314 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 KCNK7Q9Y2U2 307 aa11.86□□□□□ -0.51
HPS3-201ENST00000296051 OR2M5A3KFT3 312 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 TBX6O95947 436 aaPredicted RBP11.85□□□□□ -0.51
HPS3-201ENST00000296051 NRASP01111 189 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 GSK3AP49840 483 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 LIMK1P53667 647 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 PDLIM3Q53GG5 364 aaPredicted RBP11.85□□□□□ -0.51
HPS3-201ENST00000296051 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
HPS3-201ENST00000296051 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 SLCO1B1Q9Y6L6 691 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 CD82P27701 267 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 SRD5A2P31213 254 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 HBG1P69891 147 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 HBG2P69892 147 aa11.85□□□□□ -0.51
HPS3-201ENST00000296051 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
HPS3-201ENST00000296051 SLC22A18ASQ8N1D0 253 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms