RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SPATA46Q5T0L3 261 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 WFDC8Q8IUA0 241 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 C20orf196Q8IYI0 205 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 MORN4Q8NDC4 146 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 WBP2Q969T9 261 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 ALKBH3Q96Q83 286 aaPredicted RBP9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 ATP5SQ99766 215 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 SIRT5Q9NXA8 310 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 IL17BQ9UHF5 180 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 PROCRQ9UNN8 238 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 RNF24Q9Y225 148 aa9.59□□□□□ -0.87
PKNOX1-201ENST00000291547 SCN10AQ9Y5Y9 1956 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 RBFOX3A6NFN3 312 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 RRP8O43159 456 aaKnown RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 CEACAM16Q2WEN9 425 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 OR5A2Q8NGI9 324 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 OR10G4Q8NGN3 311 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 OR10G9Q8NGN4 311 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 OR10G7Q8NGN6 311 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 SPSB1Q96BD6 273 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 ESRP2Q9H6T0 727 aaKnown RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 RALYQ9UKM9 306 aaKnown RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 A0A087WUJ7 227 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 DNASE2O00115 360 aaPredicted RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 ZFPL1O95159 310 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 RHOBP62745 196 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 PNRC1Q12796 327 aaPredicted RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 WDR38Q5JTN6 314 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 MOB3BQ86TA1 216 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 TMEM116Q8NCL8 245 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 VN1R2Q8NFZ6 395 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 VN1R1Q9GZP7 353 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 LPAR5Q9H1C0 372 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 C20orf141Q9NUB4 165 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 OCIAD1Q9NX40 245 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 ARID2Q68CP9 1835 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 OPRK1P41145 380 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 LPAR6P43657 344 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 LAMTOR1Q6IAA8 161 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 MRGPREQ86SM8 312 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 NUBPLQ8TB37 319 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 STARD4Q96DR4 205 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 TP53RKQ96S44 253 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 ZNF552Q9H707 407 aaPredicted RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 FKBP11Q9NYL4 201 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 CACNG5Q9UF02 275 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 KLF13Q9Y2Y9 288 aaPredicted RBP9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 PRRG2O14669 202 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 IGLV3-25P01717 112 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 TCL1AP56279 114 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 TMEM33P57088 247 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 FOXF1Q12946 379 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 ZNF426Q9BUY5 554 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 SLC7A10Q9NS82 523 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 HDGFL3Q9Y3E1 203 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 LIPGQ9Y5X9 500 aa9.58□□□□□ -0.88
PKNOX1-201ENST00000291547 FCGR3BO75015 233 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 HRASP01112 189 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 SBK3P0C264 359 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 ADPRHP54922 357 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 TCTN1Q2MV58 587 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 FNDC7Q5VTL7 733 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 SARAFQ96BY9 339 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 PIK3IP1Q96FE7 263 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 TMEM272A0A1B0GTI8 110 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 SUCLG1P53597 346 aaKnown RBP9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 DPTQ07507 201 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 IL13RA2Q14627 380 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 KISS1Q15726 138 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 HLA-DRB5Q30154 266 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 DHRS13Q6UX07 377 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 OR2M3Q8NG83 312 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 APOBEC3DQ96AK3 386 aaPredicted RBP9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 HES7Q9BYE0 225 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 TRBV23-1A0A0A0MS06 115 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 OR2T8A6NH00 312 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 H0YIG0 161 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 K7ERU9 68 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 TNFSF11O14788 317 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 PLPP2O43688 288 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 GOSR1O95249 250 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 HPXP02790 462 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 RNF224P0DH78 156 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 CEACAM6P40199 344 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 SSX1Q16384 188 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 C6orf15Q6UXA7 325 aaPredicted RBP9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 KCNE4Q8WWG9 221 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 MS4A3Q96HJ5 214 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 GPX7Q96SL4 187 aaPredicted RBP9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 C3orf85A0A1B0GTC6 90 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 C7orf77A4D0Y5 90 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 HELTA6NFD8 242 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 CTAG2O75638 210 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 NGFP01138 241 aa9.57□□□□□ -0.88
PKNOX1-201ENST00000291547 PPIAP62937 165 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms