RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 OR4C3Q8NH37 302 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SLC37A2Q8TED4 501 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 TBX15Q96SF7 602 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM38BQ9NVV0 291 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SLC17A2O00624 439 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF25P17030 456 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 RASL11BQ9BPW5 248 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 MFRPQ9BY79 579 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 MPDZO75970 2070 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 A0A1W2PNR3 127 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 CDX4O14627 284 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 NDUFB6O95139 128 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 ORM2P19652 201 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 IL24Q13007 206 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 RRN3P1Q2M238 152 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 PDXPQ96GD0 296 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SIRT7Q9NRC8 400 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 CA10Q9NS85 328 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 IL17BQ9UHF5 180 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 A0A1W2PPC4 97 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 POM121BA6NF01 834 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 B4GALT3O60512 393 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 CBR3O75828 277 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 FUNDC1Q8IVP5 155 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 GBGT1Q8N5D6 347 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 LRP6O75581 1613 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SPRY3O43610 288 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 BSGP35613 385 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 PTGFRP43088 359 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 PNLIPRP2P54317 469 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 JMJD6Q6NYC1 403 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 MVB12AQ96EY5 273 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SIGLEC11Q96RL6 698 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 PRR14Q9BWN1 585 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 AKIP1Q9NQ31 210 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 A4GNTQ9UNA3 340 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 KLF3P57682 345 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 TIAL1Q01085 375 aaKnown RBP eCLIP7.82□□□□□ -1.163e-8■■■■■ 45.5
NIPBL-201ENST00000282516 DEFB109BQ30KR1 87 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 TRILQ7L0X0 811 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 NKAIN4Q8IVV8 208 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 CSNK1G1Q9HCP0 422 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 CA2P00918 260 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 PLP1P60201 277 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 MAVSQ7Z434 540 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 RNF167Q9H6Y7 350 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 C1RLQ9NZP8 487 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 EXOGQ9Y2C4 368 aaKnown RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 DNAL4O96015 105 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 PGA4P0DJD7 388 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 PGA5P0DJD9 388 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 DSCR4P56555 118 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF750Q32MQ0 723 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 MRM1Q6IN84 353 aaKnown RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM207Q6UWW9 146 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 LPAR5Q9H1C0 372 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 MSL2Q9HCI7 577 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 SCN4AP35499 1836 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 RICTORQ6R327 1708 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 NPPBP16860 134 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 DHRS2Q13268 280 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 LINC00303Q3SY05 128 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF738Q8NE65 137 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 ADAT3Q96EY9 351 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 KCNMB2Q9Y691 235 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 OR10J1P30954 320 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 GZMKP49863 264 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 SLC25A1P53007 311 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 EMP1P54849 157 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 FREM3P0C091 2139 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 C5P01031 1676 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 BTF3P20290 206 aaKnown RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 OR3A4PP47883 348 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 BTG2P78543 158 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 FAHD2BQ6P2I3 314 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF502Q8TBZ5 544 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 FAHD2AQ96GK7 314 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 HTN1P15515 57 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM183AQ8IXX5 376 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 RPS4Y2Q8TD47 263 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 AKIRIN1Q9H9L7 192 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 H7C2G1 150 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 SMIM18P0DKX4 95 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM215Q68D42 235 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 C12orf54Q6X4T0 127 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 C20orf196Q8IYI0 205 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 OR6C3Q9NZP0 311 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 CCL26Q9Y258 94 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 DEFB108AA8MXU0 73 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF324O75467 553 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 DLEU7Q6UYE1 221 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 Q7L0L9 218 aa7.81□□□□□ -1.16
NIPBL-201ENST00000282516 BAHD1Q8TBE0 780 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-201ENST00000282516 IGKV6D-21A0A0A0MT36 114 aa7.8□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM272A0A1B0GTI8 110 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms