RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 C17orf78Q8N4C9 275 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 OR8H1Q8NGG4 311 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 OR1J1Q8NGS3 322 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 CASTOR1Q8WTX7 329 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 PKIBQ9C010 78 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF442Q9H7R0 627 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 LUZP4Q9P127 313 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 FAM215AQ9Y5M1 114 aa8.2□□□□□ -1.1
TRIM55-201ENST00000276573 A0A0B4J2A0 478 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SFT2D2O95562 160 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 CD8AP01732 235 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 OR5H8P0DN80 308 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SELEP16581 610 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 ECI1P42126 302 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 GMFBP60983 142 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SEC61A1P61619 476 aaKnown RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 IL24Q13007 206 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 PSG7Q13046 419 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 MPV17LQ2QL34 196 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 ALKBH6Q3KRA9 238 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 FAM76BQ5HYJ3 339 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 C1orf185Q5T7R7 199 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 BHLHA15Q7RTS1 189 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SPACA3Q8IXA5 215 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 FAM210AQ96ND0 272 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 MICU1Q9BPX6 476 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF2Q9BSG1 426 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 PLK3Q9H4B4 646 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 DECR2Q9NUI1 292 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 NECAP2Q9NVZ3 263 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SHPKQ9UHJ6 478 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 URB1O60287 2271 aaKnown RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 OR5H1A6NKK0 313 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 RFPL4AA6NLU0 287 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 IQCF6A8MYZ5 107 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 RFPL4AL1F8VTS6 287 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 L7N2F9 121 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 CCSO14618 274 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 IGLV1-44P01699 117 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 PGAM2P15259 253 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 PI3P19957 117 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 TIMP3P35625 211 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SUPT4H1P63272 117 aaKnown RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 BAMBIQ13145 260 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 OPCMLQ14982 345 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 IGFBP7Q16270 282 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 EIF2S3LQ2VIR3 472 aaKnown RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 CLEC18BQ6UXF7 455 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 EXTL1Q92935 676 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 MARS2Q96GW9 593 aaKnown RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 SEC22AQ96IW7 307 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF488Q96MN9 340 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 DHRS9Q9BPW9 319 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 DPCDQ9BVM2 203 aaPredicted RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 RTL8AQ9BWD3 113 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 LIME1Q9H400 295 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF286AQ9HBT8 521 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 OBP2BQ9NPH6 170 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 C12orf4Q9NQ89 552 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 RCC2Q9P258 522 aaKnown RBP8.19□□□□□ -1.1
TRIM55-201ENST00000276573 IL36RNQ9UBH0 155 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 U3KQ87 197 aa8.19□□□□□ -1.1
TRIM55-201ENST00000276573 GVINP1Q7Z2Y8 2422 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 TRAV14DV4A0A0A6YYC5 116 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 J3QT63 122 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 MPC2O95563 127 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 HOXD4P09016 255 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-201ENST00000276573 CECR9P0C854 216 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 PRKACAP17612 351 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 C4BPBP20851 252 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 TUBG1P23258 451 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 DUSP1P28562 367 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 CALCRP30988 508 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 SORDQ00796 357 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 NHLH1Q02575 133 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 SRSF7Q16629 238 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRIM55-201ENST00000276573 TBR1Q16650 682 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF324BQ6AW86 544 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-201ENST00000276573 SLC22A25Q6T423 547 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 Q6ZPA2 131 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 FAM58AQ8N1B3 248 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 RPRMLQ8N4K4 120 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 FAM169BQ8N8A8 192 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 LILRB4Q8NHJ6 448 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 FAM57AQ8TBR7 257 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 KLF14Q8TD94 323 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-201ENST00000276573 ELMOD3Q96FG2 381 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 CLEC4MQ9H2X3 399 aaPredicted RBP8.18□□□□□ -1.1
TRIM55-201ENST00000276573 RHOFQ9HBH0 211 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 TUBG2Q9NRH3 451 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 C14orf166Q9Y224 244 aaKnown RBP8.18□□□□□ -1.1
TRIM55-201ENST00000276573 AMDHD2Q9Y303 409 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 FAM186AA6NE01 2351 aa8.18□□□□□ -1.1
TRIM55-201ENST00000276573 NOS1APO75052 506 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms