RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 HHEXQ03014 270 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 CLN3Q13286 438 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 RTP5Q14D33 572 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 ZNF141Q15928 474 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 ISXQ2M1V0 245 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 RTN4IP1Q8WWV3 396 aaPredicted RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 CTHRC1Q96CG8 243 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
HERC6-202ENST00000273960 OBP2AQ9NY56 170 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 C5orf63A6NC05 138 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 M0R143 59 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 HPNP05981 417 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 MYF5P13349 255 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 BMP5P22003 454 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 IL15RAQ13261 267 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 GNMTQ14749 295 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 HIKESHIQ53FT3 197 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 OR5C1Q8NGR4 320 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 SLAMF6Q96DU3 332 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 GPR173Q9NS66 373 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 VDAC3Q9Y277 283 aa11.25□□□□□ -0.61
HERC6-202ENST00000273960 NPIPA5E9PKD4 350 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 LYL1P12980 280 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 GABRG2P18507 467 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 H3F3AP84243 136 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 ZNF117Q03924 483 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 ICAM4Q14773 271 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
HERC6-202ENST00000273960 TOMM20Q15388 145 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 SPIN3Q5JUX0 258 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 CMTM1Q8IZ96 169 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 WWTR1Q9GZV5 400 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 NPIPA1Q9UND3 350 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
HERC6-202ENST00000273960 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 DFFBO76075 338 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 EPHA1P21709 976 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 PPA1Q15181 289 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 TAF9Q16594 264 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 OR10J5Q8NHC4 309 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 FAAP24Q9BTP7 215 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 PLEKHA2Q9HB19 425 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 SEMA5BQ9P283 1151 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 MCTS1Q9ULC4 181 aaKnown RBP11.24□□□□□ -0.61
HERC6-202ENST00000273960 FUT9Q9Y231 359 aa11.24□□□□□ -0.61
HERC6-202ENST00000273960 NUP210LQ5VU65 1888 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 C17orf105B2RV13 164 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 TNFRSF4P43489 277 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 ELLP55199 621 aaPredicted RBP11.23□□□□□ -0.61
HERC6-202ENST00000273960 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
HERC6-202ENST00000273960 DEFB133Q30KQ1 61 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 KCNG3Q8TAE7 436 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
HERC6-202ENST00000273960 KLHDC7BQ96G42 594 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 URM1Q9BTM9 101 aaKnown RBP11.23□□□□□ -0.61
HERC6-202ENST00000273960 TBL1XR1Q9BZK7 514 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
HERC6-202ENST00000273960 FAM230AA0A1W2PPH8 454 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 CEBPZOSA8MTT3 80 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 SMIM10L1P0DMW3 83 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 FSTP19883 344 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 S100A7P31151 101 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 POLR2HP52434 150 aaKnown RBP11.23□□□□□ -0.61
HERC6-202ENST00000273960 UCP3P55916 312 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 QRFPP83859 136 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 FOXK1P85037 733 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 OR5I1Q13606 314 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 TESK1Q15569 626 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 SMIM10Q96HG1 83 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 LIME1Q9H400 295 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 KIR3DX1Q9H7L2 352 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 FIGNL2A6NMB9 653 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 TMEM14DPA8MWL7 114 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 K7N7A8 449 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 HERPUD1Q15011 391 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 CALHM1Q8IU99 346 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 ZNF283Q8N7M2 679 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 NT5CQ8TCD5 201 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 SDSLQ96GA7 329 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 DIRC2Q96SL1 478 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
HERC6-202ENST00000273960 A0A0U1RQK1 487 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 F5H5K5 113 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 CLDN34H7C241 214 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 CA11O75493 328 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 GP1BBP13224 206 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 ZNF154Q13106 437 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
HERC6-202ENST00000273960 VAX1Q5SQQ9 334 aa11.22□□□□□ -0.61
HERC6-202ENST00000273960 MAML2Q8IZL2 1156 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms