RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 SMR3AQ99954 134 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 OR2J1Q9GZK6 312 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 FGF23Q9GZV9 251 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 BARX1Q9HBU1 254 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 CA10Q9NS85 328 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 NUBP2Q9Y5Y2 271 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 TCRBP04435 133 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 HIST1H1DP16402 221 aaKnown RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 GIFP27352 417 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 CALCRP30988 508 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 FAUP35544 74 aaKnown RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 PNLIPRP3Q17RR3 467 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 PLAC9Q5JTB6 97 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 RSBN1Q5VWQ0 802 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-201ENST00000270061 OR2T2Q6IF00 324 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 SAXO1Q8IYX7 474 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 TMEM229BQ8NBD8 167 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 SLC25A40Q8TBP6 338 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 OR5P3Q8WZ94 311 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 POM121Q96HA1 1249 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 BCL2L14Q9BZR8 327 aa20.87■□□□□ 0.93
SSBP4-201ENST00000270061 SMAD7O15105 426 aaKnown RBP20.86■□□□□ 0.93
SSBP4-201ENST00000270061 ANGPTL7O43827 346 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 CSTBP04080 98 aaKnown RBP20.86■□□□□ 0.93
SSBP4-201ENST00000270061 GTF2F2P13984 249 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 GNB3P16520 340 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 ARL6IP1Q15041 203 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 SPATA46Q5T0L3 261 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 ZNF554Q86TJ5 538 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 Q8NFD4 153 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 Q96M66 194 aa20.86■□□□□ 0.93
SSBP4-201ENST00000270061 ELF5Q9UKW6 265 aaPredicted RBP20.86■□□□□ 0.93
SSBP4-201ENST00000270061 IGKV1-12A0A0C4DH73 117 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 INMT-MINDY4F8WBC2 141 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 AKR7A2O43488 359 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 IGKV1D-12P01611 117 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 MARS2Q96GW9 593 aaKnown RBP20.85■□□□□ 0.93
SSBP4-201ENST00000270061 IGHV2OR16-5A0A0B4J2B6 119 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 OR5B21A6NL26 309 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 IQCF6A8MYZ5 107 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 MFNGO00587 321 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 HTR3BO95264 441 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 RAG2P55895 527 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 TAS2R19P59542 299 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 TMEM255AQ5JRV8 349 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 VHLLQ6RSH7 139 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 BTN2A1Q7KYR7 527 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 CALHM1Q8IU99 346 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 OR51F2Q8NH61 342 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 KCNK7Q9Y2U2 307 aa20.85■□□□□ 0.93
SSBP4-201ENST00000270061 NOP16Q9Y3C1 178 aaKnown RBP20.85■□□□□ 0.93
SSBP4-201ENST00000270061 LILRA1O75019 489 aa20.84■□□□□ 0.93
SSBP4-201ENST00000270061 AKAIN1P0CW23 69 aa20.84■□□□□ 0.93
SSBP4-201ENST00000270061 RCVRNP35243 200 aa20.84■□□□□ 0.93
SSBP4-201ENST00000270061 SERPINF1P36955 418 aa20.84■□□□□ 0.93
SSBP4-201ENST00000270061 BHLHE23Q8NDY6 225 aa20.84■□□□□ 0.93
SSBP4-201ENST00000270061 NUP37Q8NFH4 326 aa20.84■□□□□ 0.93
SSBP4-201ENST00000270061 CR1P17927 2039 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 A0A0B4J293 547 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 MEIS3P1A6NDR6 274 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 ZNF732B4DXR9 585 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 CA11O75493 328 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 GPM6AP51674 278 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 CCR6P51684 374 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 ERVS71-1P61550 626 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 CLEC9AQ6UXN8 241 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 KLF14Q8TD94 323 aaPredicted RBP20.83■□□□□ 0.93
SSBP4-201ENST00000270061 ARHGAP5-AS1Q96IT6 56 aa20.83■□□□□ 0.93
SSBP4-201ENST00000270061 PLATP00750 562 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 BLVRBP30043 206 aaPredicted RBP20.82■□□□□ 0.92
SSBP4-201ENST00000270061 GNG3P63215 75 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 PSG7Q13046 419 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 TATDN3Q17R31 274 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 SWI5Q1ZZU3 235 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 TRAPPC6BQ86SZ2 158 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 OR4C16Q8NGL9 310 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 NAV3Q8IVL0 2385 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 CHD3Q12873 2000 aaKnown RBP20.82■□□□□ 0.92
SSBP4-201ENST00000270061 ABCA1O95477 2261 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 CYB5AP00167 134 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 CD74P04233 296 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 OR4A8P0C604 315 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 HLA-DMAP28067 261 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 HAAOP46952 286 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 SNRPD2P62316 118 aaKnown RBP20.82■□□□□ 0.92
SSBP4-201ENST00000270061 ADIPOQQ15848 244 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 MST1LQ2TV78 715 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 SFRP4Q6FHJ7 346 aaPredicted RBP20.82■□□□□ 0.92
SSBP4-201ENST00000270061 ELP2Q6IA86 826 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 STEAP1BQ6NZ63 245 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 SLC25A26Q70HW3 274 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 ZNF573Q86YE8 665 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 OSR2Q8N2R0 312 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 PECRQ9BY49 303 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 ZNF442Q9H7R0 627 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 NUDT15Q9NV35 164 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 ANAPC10Q9UM13 185 aa20.82■□□□□ 0.92
SSBP4-201ENST00000270061 SERPINE3A8MV23 424 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 VSTM5A8MXK1 200 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 SSX5O60225 188 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms