RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ABHD17AQ96GS6 310 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 SCGB3A2Q96PL1 93 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 C1QTNF6Q9BXI9 259 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 OR51I2Q9H344 312 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 RCC2Q9P258 522 aaKnown RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 TRAPPC2LH3BP13 241 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 IGLV1-44P01699 117 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 RAC2P15153 192 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 ARPC4P59998 168 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 IL24Q13007 206 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 SURF2Q15527 256 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-201ENST00000269318 C1orf185Q5T7R7 199 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF324BQ6AW86 544 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-201ENST00000269318 LPCAT3Q6P1A2 487 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 RPRMLQ8N4K4 120 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 PKIBQ9C010 78 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 OBP2BQ9NPH6 170 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 DECR2Q9NUI1 292 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 IL36RNQ9UBH0 155 aa14.21□□□□□ -0.13
CCDC40-201ENST00000269318 VAMP1P23763 118 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 SSTR2P30874 369 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF81P51508 661 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 BAMBIQ13145 260 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 KRTCAP3Q53RY4 240 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 TMEM211Q6ICI0 200 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 OR1J1Q8NGS3 322 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 PHB2Q99623 299 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 C12orf4Q9NQ89 552 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 FAM221AA4D161 298 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 DBX1A6NMT0 343 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 IQCF6A8MYZ5 107 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 TPD52L2O43399 206 aaKnown RBP14.2□□□□□ -0.14
CCDC40-201ENST00000269318 CXCL2P19875 107 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 PI3P19957 117 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 PSG7Q13046 419 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 IGFBP7Q16270 282 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 MPV17LQ2QL34 196 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 EIF2S3LQ2VIR3 472 aaKnown RBP14.2□□□□□ -0.14
CCDC40-201ENST00000269318 FAM76BQ5HYJ3 339 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 BEND4Q6ZU67 534 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 BHLHA15Q7RTS1 189 aaPredicted RBP14.2□□□□□ -0.14
CCDC40-201ENST00000269318 WDR86Q86TI4 376 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 LIME1Q9H400 295 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 TP53TG5Q9Y2B4 290 aa14.2□□□□□ -0.14
CCDC40-201ENST00000269318 GTF3C1Q12789 2109 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 HMSDA8MTL9 139 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 TSC22D2O75157 780 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 CD8AP01732 235 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 CECR9P0C854 216 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 OR5H8P0DN80 308 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 TIMP3P35625 211 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 SUPT4H1P63272 117 aaKnown RBP14.19□□□□□ -0.14
CCDC40-201ENST00000269318 ALKBH6Q3KRA9 238 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 LIN54Q6MZP7 749 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 CASTOR1Q8WTX7 329 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 EXTL1Q92935 676 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 MARS2Q96GW9 593 aaKnown RBP14.19□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF2Q9BSG1 426 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF442Q9H7R0 627 aa14.19□□□□□ -0.14
CCDC40-201ENST00000269318 OR5H1A6NKK0 313 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 MCRIP1C9JLW8 97 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 RPS2P15880 293 aaKnown RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 GLRA1P23415 457 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 NFYAP23511 347 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 FAM180AQ6UWF9 173 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 DHRS11Q6UWP2 260 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF767PQ75MW2 155 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 FAM57AQ8TBR7 257 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 KLF14Q8TD94 323 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF488Q96MN9 340 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 RTL8AQ9BWD3 113 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 PLK3Q9H4B4 646 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 NECAP2Q9NVZ3 263 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 INTS1Q8N201 2190 aaKnown RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ANKRD11Q6UB99 2663 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 J3QT63 122 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 K7ENP7 123 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 CCSO14618 274 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 GFRA3O60609 400 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 RHBDL1O75783 438 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 SFT2D2O95562 160 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 SELEP16581 610 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 CALCRP30988 508 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 MPV17P39210 176 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ECI1P42126 302 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 SEC61A1P61619 476 aaKnown RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF474Q6S9Z5 364 aaPredicted RBP14.18□□□□□ -0.14
CCDC40-201ENST00000269318 LINC00596Q86U02 117 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 FAM169BQ8N8A8 192 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ELMOD3Q96FG2 381 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 MICU1Q9BPX6 476 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 ZNF286AQ9HBT8 521 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
CCDC40-201ENST00000269318 BSNQ9UPA5 3926 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 APC2O95996 2303 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 TRAV14DV4A0A0A6YYC5 116 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 IGHV1-18A0A0C4DH31 117 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 LRP5LA4QPB2 252 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 SNAPC5O75971 98 aa14.17□□□□□ -0.14
CCDC40-201ENST00000269318 MPC2O95563 127 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms