RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 TIMM10BQ9Y5J6 103 aa10.21□□□□□ -0.77
VPS33A-201ENST00000267199 A6NCN8 305 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 HEXAP06865 529 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 CTSBP07858 339 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 LPAR6P43657 344 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 FOXL2P58012 376 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 GGTLC2Q14390 218 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 VAMP3Q15836 100 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF468Q5VIY5 522 aaPredicted RBP10.21□□□□□ -0.78
VPS33A-201ENST00000267199 ABCA7Q8IZY2 2146 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 SPEM1Q8N4L4 309 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 PP6455Q8WZ26 134 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 EXTL1Q92935 676 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 ADAT3Q96EY9 351 aaPredicted RBP10.21□□□□□ -0.78
VPS33A-201ENST00000267199 MTCH1Q9NZJ7 389 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 APC2O95996 2303 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 KIF26BQ2KJY2 2108 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 DICER1Q9UPY3 1922 aaKnown RBP10.21□□□□□ -0.78
VPS33A-201ENST00000267199 OR2M5A3KFT3 312 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 F6UZH7 168 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 DNASE2O00115 360 aaPredicted RBP10.21□□□□□ -0.78
VPS33A-201ENST00000267199 TNFSF11O14788 317 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 IGHEP01854 428 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 GALR1P47211 349 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 CCL7P80098 99 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 Q3ZCU0 254 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 MS4A10Q96PG2 267 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 GPR87Q9BY21 358 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 MYOTQ9UBF9 498 aa10.21□□□□□ -0.78
VPS33A-201ENST00000267199 MAP1LC3B2A6NCE7 125 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 AQP7O14520 342 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 PNPP00491 289 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 GCH1P30793 250 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 CATSPERDQ86XM0 798 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 ABHD5Q8WTS1 349 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 KISS1RQ969F8 398 aaPredicted RBP10.2□□□□□ -0.78
VPS33A-201ENST00000267199 MCHR2Q969V1 340 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 MAP1LC3BQ9GZQ8 125 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 WDR13Q9H1Z4 485 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 PARP11Q9NR21 331 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 IGHV4-34P06331 123 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 SMIM10L1P0DMW3 83 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 FCARP24071 287 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 GUSBP11Q6P575 273 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 OR8B12Q8NGG6 310 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 PPP1R35Q8TAP8 253 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 BSCL2Q96G97 398 aaPredicted RBP10.2□□□□□ -0.78
VPS33A-201ENST00000267199 SMIM10Q96HG1 83 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 ADGRG7Q96K78 797 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 SLC25A22Q9H936 323 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 TRAPPC1Q9Y5R8 145 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 A0A1W2PPC1 479 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 KRASP01116 189 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 BGLAPP02818 100 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 PATE4P0C8F1 98 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF25P17030 456 aaPredicted RBP10.2□□□□□ -0.78
VPS33A-201ENST00000267199 COX5AP20674 150 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 ZBTB25P24278 435 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 THBS4P35443 961 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 NHLH2Q02577 135 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 PABPC1L2AQ5JQF8 200 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 BTNL8Q6UX41 500 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 LHFPL2Q6ZUX7 228 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 DAZAP1Q96EP5 407 aaKnown RBP10.2□□□□□ -0.78
VPS33A-201ENST00000267199 HDHD3Q9BSH5 251 aaPredicted RBP10.2□□□□□ -0.78
VPS33A-201ENST00000267199 OR51M1Q9H341 326 aa10.2□□□□□ -0.78
VPS33A-201ENST00000267199 OR5H15A6NDH6 313 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 LMX1BO60663 402 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 CTXN2P0C2S0 81 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 SMAD4Q13485 552 aaKnown RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 CEACAM16Q2WEN9 425 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 TDHQ8IZJ6 230 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 C12orf49Q9H741 205 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 LANCL2Q9NS86 450 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 VWA8A3KMH1 1905 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 TP53BP1Q12888 1972 aaPredicted RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 MPTX1A8MV57 137 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 KLF4O43474 513 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 PMCHP20382 165 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 FUT3P21217 361 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 DYNLT3P51808 116 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 UBE2V2Q15819 145 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 TMEM241Q24JQ0 296 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ANKRD37Q7Z713 158 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ERGIC1Q969X5 290 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 VAMP8Q9BV40 100 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 PECRQ9BY49 303 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 C3orf85A0A1B0GTC6 90 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 OR5H1A6NKK0 313 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 UPK3AO75631 287 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 CST2P09228 141 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 OR8U8P0C7N1 319 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 NXPH1P58417 271 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 HIST1H3AP68431 136 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 INSM1Q01101 510 aaPredicted RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 PRAMEF5Q5TYX0 476 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 PRAMEF6Q5VXH4 476 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 DHRS11Q6UWP2 260 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms