RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GABRA3P34903 492 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 CTXN1P60606 82 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 TRA2BP62995 288 aaKnown RBP7.68□□□□□ -1.18
VAPB-201ENST00000265619 GPR18Q14330 331 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 RTP5Q14D33 572 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 CEBPEQ15744 281 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 ZIC1Q15915 447 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 TSPO2Q5TGU0 170 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 ADAMTSL4Q6UY14 1074 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 SSX7Q7RTT5 188 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 SLC16A14Q7RTX9 510 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 BANF2Q9H503 90 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 WISP1O95388 367 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 ANOS1P23352 680 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 ATP6V0CP27449 155 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 PPP1CAP62136 330 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 RAB11AP62491 216 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 H3F3AP84243 136 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 SLC17A1Q14916 467 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 MPV17LQ2QL34 196 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 METRNLQ641Q3 311 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 OR2G3Q8NGZ4 309 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 THAP3Q8WTV1 239 aaPredicted RBP7.68□□□□□ -1.18
VAPB-201ENST00000265619 IL22RA2Q969J5 263 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 TAAR8Q969N4 342 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 BMFQ96LC9 184 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 ST6GALNAC5Q9BVH7 336 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 VN1R1Q9GZP7 353 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 V9GYS6 101 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 GVINP1Q7Z2Y8 2422 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 AHCTF1Q8WYP5 2266 aa7.68□□□□□ -1.18
VAPB-201ENST00000265619 CDC14CA4D256 554 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 ARPC3O15145 178 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 CLEC3AO75596 197 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OMGP23515 440 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 CDKN1AP38936 164 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 SUCLG1P53597 346 aaKnown RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 TMEM50BP56557 158 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 SELENOTP62341 195 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 LEMD1Q68G75 181 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 DGAT2L6Q6ZPD8 337 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 SGPP2Q8IWX5 399 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 TMEM52Q8NDY8 209 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OR10S1Q8NGN2 331 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 CLDND2Q8NHS1 167 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 TSPAN32Q96QS1 320 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 TP53RKQ96S44 253 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 PCGF1Q9BSM1 259 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 LMF2Q9BU23 707 aaKnown RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 FSCN3Q9NQT6 498 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 AURKAIP1Q9NWT8 199 aaPredicted RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 AK3Q9UIJ7 227 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 VAX2Q9UIW0 290 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 MMP17Q9ULZ9 603 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OSGIN2Q9Y236 505 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 TRBV24-1A0A075B6N3 115 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 LOC102724200A0A096LPH7 203 aaPredicted RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 CLDN34H7C241 214 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 UMODP07911 640 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 POU2F2P09086 479 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 PF4V1P10720 104 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 ERGP11308 486 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OR3A2P47893 321 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 RPS4XP62701 263 aaKnown RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 NNATQ16517 81 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 SLC25A24Q6NUK1 477 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 DCXRQ7Z4W1 244 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OR13C3Q8NGS6 347 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OR2A1Q8NGT9 310 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 LMX1AQ8TE12 382 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 TMEM171Q8WVE6 324 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 FBRSQ9HAH7 460 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 RNF114Q9Y508 228 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 A0A1W2PPQ1 181 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 M0QZK8 103 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 GGCTO75223 188 aaKnown RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 CBR3O75828 277 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 FPR2P25090 351 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 VAMP2P63027 116 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 ZNF765Q7L2R6 523 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 CPEB2Q7Z5Q1 589 aaKnown RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 LHFPL1Q86WI0 220 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 LRRC25Q8N386 305 aaPredicted RBP7.67□□□□□ -1.18
VAPB-201ENST00000265619 LRRC75AQ8NAA5 344 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 OIT3Q8WWZ8 545 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 COX14Q96I36 57 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 GPR35Q9HC97 309 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 ZNF319Q9P2F9 582 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 TUBD1Q9UJT1 453 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 RPH3ALQ9UNE2 315 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 EMC9Q9Y3B6 208 aa7.67□□□□□ -1.18
VAPB-201ENST00000265619 MYO7BQ6PIF6 2116 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 HLA-DQA2P01906 255 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 ZNF888P0CJ79 500 aaPredicted RBP7.66□□□□□ -1.18
VAPB-201ENST00000265619 TDGF1P13385 188 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 PDLIM4P50479 330 aa7.66□□□□□ -1.18
VAPB-201ENST00000265619 RPL23AP62750 156 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms