RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 PATE1Q8WXA2 126 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 DIRC2Q96SL1 478 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 NXF5Q9H1B4 397 aaKnown RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 BANF2Q9H503 90 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 TCRBV21S2A2A0A5A6 115 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 ALG1L2C9J202 215 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 PLPP3O14495 311 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 CDC14BO60729 498 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 SCGB1D1O95968 90 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 IL12BP29460 328 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 CCKARP32238 428 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 BPIFB3P59826 476 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 HSF1Q00613 529 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 HHEXQ03014 270 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 TRA2AQ13595 282 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP54-201ENST00000264883 IL13RA2Q14627 380 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 P2RY6Q15077 328 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 CHRFAM7AQ494W8 412 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 Q6ZS52 159 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 MRPL52Q86TS9 123 aaKnown RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 ADAT3Q96EY9 351 aaPredicted RBP11.48□□□□□ -0.57
NUP54-201ENST00000264883 FAAP24Q9BTP7 215 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 GAB2Q9UQC2 676 aa11.48□□□□□ -0.57
NUP54-201ENST00000264883 CRYM-AS1A6NIL9 109 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 PPP1CAP62136 330 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 Q6ZSR6 202 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 P4HA3Q7Z4N8 544 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 SLC26A10Q8NG04 563 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 NEK7Q8TDX7 302 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 MMABQ96EY8 250 aaPredicted RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 SPACA5Q96QH8 159 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 LPAR2Q9HBW0 351 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 COA3Q9Y2R0 106 aaPredicted RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 TMED7-TICAM2A0A0A6YYA0 188 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 CDC14CA4D256 554 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 TMEM150CB9EJG8 249 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 MPZL1O95297 269 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 IGLV3-19P01714 112 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 H2BFMP0C1H6 154 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 DAP3P51398 398 aaKnown RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 ZP4Q12836 540 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 ZNF266Q14584 549 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 GRINAQ7Z429 371 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 OR5D14Q8NGL3 314 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 KCNG3Q8TAE7 436 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 PTPMT1Q8WUK0 201 aaPredicted RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 ACY3Q96HD9 319 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 TMEM59Q9BXS4 323 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 MOB1AQ9H8S9 216 aa11.47□□□□□ -0.57
NUP54-201ENST00000264883 POLR3KQ9Y2Y1 108 aaPredicted RBP11.47□□□□□ -0.57
NUP54-201ENST00000264883 CPAMD8Q8IZJ3 1885 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 CTSDP07339 412 aaPredicted RBP11.46□□□□□ -0.57
NUP54-201ENST00000264883 BCKDHBP21953 392 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 ECI1P42126 302 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 PDLIM4P50479 330 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 RAB11AP62491 216 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 FOXK1P85037 733 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 EWSR1Q01844 656 aaKnown RBP eCLIP11.46□□□□□ -0.57
NUP54-201ENST00000264883 SP5Q6BEB4 398 aaPredicted RBP11.46□□□□□ -0.57
NUP54-201ENST00000264883 KLHL24Q6TFL4 600 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 ZNF66Q6ZN08 573 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 OR10G4Q8NGN3 311 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 OR14L1PQ8NHC6 308 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 ADIPOR1Q96A54 375 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 ADOQ96SZ5 270 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 URM1Q9BTM9 101 aaKnown RBP11.46□□□□□ -0.57
NUP54-201ENST00000264883 TBL1XR1Q9BZK7 514 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 GPR84Q9NQS5 396 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 FKBP11Q9NYL4 201 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 ALPK2Q86TB3 2170 aa11.46□□□□□ -0.57
NUP54-201ENST00000264883 PPP5D1E7EU14 171 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 ST8SIA3O43173 380 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 TCF21O43680 179 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 NUDT14O95848 222 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 CTSBP07858 339 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 IRF2P14316 349 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 TFF2Q03403 129 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 TMEM31Q5JXX7 168 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 FBXW12Q6X9E4 464 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 C17orf78Q8N4C9 275 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 OR5L2Q8NGL0 311 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 ZNF524Q96C55 264 aa11.46□□□□□ -0.58
NUP54-201ENST00000264883 ZNF2Q9BSG1 426 aaPredicted RBP11.46□□□□□ -0.58
NUP54-201ENST00000264883 A0A1W2PP11 408 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 CA11O75493 328 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 IGKV3-11P04433 115 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 ZNF43P17038 809 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 BRS3P32247 399 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
NUP54-201ENST00000264883 TLE4Q04727 773 aa11.45□□□□□ -0.58
NUP54-201ENST00000264883 EIF3IQ13347 325 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms