RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PRR27Q6MZM9 219 aa11.94□□□□□ -0.5
PDGFRB-201ENST00000261799 CCDC190Q86UF4 302 aa11.94□□□□□ -0.5
PDGFRB-201ENST00000261799 RNF2Q99496 336 aa11.94□□□□□ -0.5
PDGFRB-201ENST00000261799 MSL2Q9HCI7 577 aa11.94□□□□□ -0.5
PDGFRB-201ENST00000261799 NPAP1Q9NZP6 1156 aa11.94□□□□□ -0.5
PDGFRB-201ENST00000261799 B9A039 149 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 XRCC3O43542 346 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 OR2J3O76001 311 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 NKX2-5P52952 324 aaPredicted RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 DCAF12L2Q5VW00 463 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 WFDC3Q8IUB2 231 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 KCNRGQ8N5I3 272 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 ZNF418Q8TF45 676 aaPredicted RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 MOGAT1Q96PD6 335 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 IL17BQ9UHF5 180 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 TRDCB7Z8K6 153 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 ORM1P02763 201 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 HIST1H1DP16402 221 aaKnown RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 CDKN2AP42771 156 aaKnown RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 ZNF787Q6DD87 383 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 LYG2Q86SG7 212 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 SVBPQ8N300 66 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 LINC01560Q8TB33 94 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 OR6C68A6NDL8 312 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 CTLA4P16410 223 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 COL10A1Q03692 680 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 TMEM179BQ7Z7N9 219 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 OR1B1Q8NGR6 318 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 A0A1W2PQM1 296 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 HRKO00198 91 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 TOX4O94842 621 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 MPZL1O95297 269 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 RPS10P46783 165 aaKnown RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 H3F3AP84243 136 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 FDCSPQ8NFU4 85 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 ZNF552Q9H707 407 aaPredicted RBP11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 SIRT5Q9NXA8 310 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 BGLAPP02818 100 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 PMELP40967 661 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 FAM162BQ5T6X4 162 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 CDCP2Q5VXM1 449 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 C12orf73Q69YU5 71 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 HIST2H3AQ71DI3 136 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 PARP11Q9NR21 331 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 CASP8AP2Q9UKL3 1982 aa11.93□□□□□ -0.5
PDGFRB-201ENST00000261799 GAPDHP04406 335 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 RPL12P30050 165 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 TAGLN2P37802 199 aaKnown RBP11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 ZNF90Q03938 601 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 OR13F1Q8NGS4 319 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 GUCD1Q96NT3 240 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 TMEM272A0A1B0GTI8 110 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 A0A1W2PR77 199 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 TMEM8BA6NDV4 472 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 SLC25A4P12235 298 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 PI3P19957 117 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 RAB5CP51148 216 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 P2RX3P56373 397 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 DGCR2P98153 550 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 LCN15Q6UWW0 184 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 LHX4Q969G2 390 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 R3HDM4Q96D70 268 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 OR2J1Q9GZK6 312 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 NGFRP08138 427 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 CBR1P16152 277 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 WNT3P56703 355 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 ACOT7LQ6ZUV0 252 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 UBE3DQ7Z6J8 389 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 MAP6Q96JE9 813 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 ZNF724A8MTY0 619 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 GDF9O60383 454 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
PDGFRB-201ENST00000261799 C3orf85A0A1B0GTC6 90 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 A0A1B0GTL3 188 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 RAB19A4D1S5 217 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 SIX6O95475 246 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 CD3DP04234 171 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 SNRPNP63162 240 aaKnown RBP11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 RRN3P1Q2M238 152 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 LAMTOR1Q6IAA8 161 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 ARRDC1Q8N5I2 433 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 ZBTB44Q8NCP5 570 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 TMEM165Q9HC07 324 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 HS3ST3B1Q9Y662 390 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 B3GALNT1O75752 331 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 CDK5Q00535 292 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 FABP5Q01469 135 aa11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 LILRB1Q8NHL6 650 aaPredicted RBP11.91□□□□□ -0.5
PDGFRB-201ENST00000261799 FAM57AQ8TBR7 257 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms