RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PPP1R1AQ13522 171 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 RAB32Q13637 225 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 INPP5JQ15735 1006 aaPredicted RBP12.71□□□□□ -0.37
CUX2-201ENST00000261726 B3GNTL1Q67FW5 361 aaPredicted RBP12.71□□□□□ -0.37
CUX2-201ENST00000261726 LRP11Q86VZ4 500 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 ATP5SQ99766 215 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 DHRS3O75911 302 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 CEACAM3P40198 252 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 HERVK_113P61574 105 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 FAHD1Q6P587 224 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 SH2D2AQ9NP31 389 aa12.71□□□□□ -0.37
CUX2-201ENST00000261726 TCRBV5S1A1TA0A578 114 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 LANCL1O43813 399 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 SFT2D2O95562 160 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 PGA3P0DJD8 388 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 TCTAP57738 103 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 TEX101Q9BY14 249 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 EDIL3O43854 480 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 MDH2P40926 338 aaKnown RBP12.71□□□□□ -0.38
CUX2-201ENST00000261726 B2MP61769 119 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 DOLPP1Q86YN1 238 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 SPEM1Q8N4L4 309 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.38
CUX2-201ENST00000261726 PRR7Q8TB68 274 aa12.71□□□□□ -0.38
CUX2-201ENST00000261726 SLC6A1P30531 599 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 BCL7CQ8WUZ0 217 aaPredicted RBP12.7□□□□□ -0.38
CUX2-201ENST00000261726 ASB13Q8WXK3 278 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 CLDN34H7C241 214 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 CDX4O14627 284 aaPredicted RBP12.7□□□□□ -0.38
CUX2-201ENST00000261726 RNFT1Q5M7Z0 435 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 SBK3P0C264 359 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 ZP3P21754 424 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 DYNLT3P51808 116 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 SLC25A30Q5SVS4 291 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 NTNG2Q96CW9 530 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 POM121Q96HA1 1249 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 RASL11BQ9BPW5 248 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 C9orf170A2RU37 121 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 GCSHP23434 173 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
CUX2-201ENST00000261726 ZDHHC22Q8N966 263 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 BET1LQ9NYM9 111 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 MELTFP08582 738 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 CCR2P41597 374 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 DTD1Q8TEA8 209 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 DYNLRB2Q8TF09 96 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 ADIPOR1Q96A54 375 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 FAM210BQ96KR6 192 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 IL17BQ9UHF5 180 aa12.7□□□□□ -0.38
CUX2-201ENST00000261726 LMO7DNF2Z398 122 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 TMIGD3P0DMS9 266 aaPredicted RBP12.69□□□□□ -0.38
CUX2-201ENST00000261726 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 DUSP21Q9H596 190 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ZNF385DQ9H6B1 395 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 FER1L6Q2WGJ9 1857 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 A0A1B0GTH9 108 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ACVR1Q04771 509 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ZNF841Q6ZN19 808 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 SEC11CQ9BY50 192 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 METTL12A8MUP2 240 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 GALNSP34059 522 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ZBTB37Q5TC79 503 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 FAM219BQ5XKK7 198 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ZNF793Q6ZN11 406 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ANKRD37Q7Z713 158 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 CXXC4Q9H2H0 198 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 NAA60Q9H7X0 242 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 PRR13Q9NZ81 148 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 CST2P09228 141 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 ST3GAL2Q16842 350 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 C4orf45Q96LM5 186 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 LINC01387J3KSC0 135 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 GNG7O60262 68 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 DLX1P56177 255 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 CDC20Q12834 499 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 C16orf47Q6ZP98 133 aaPredicted RBP12.69□□□□□ -0.38
CUX2-201ENST00000261726 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
CUX2-201ENST00000261726 PPM1DO15297 605 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 MT-CO3P00414 261 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 HLXQ14774 488 aaPredicted RBP12.68□□□□□ -0.38
CUX2-201ENST00000261726 MUC20Q8N307 709 aaPredicted RBP12.68□□□□□ -0.38
CUX2-201ENST00000261726 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 SLC35B3Q9H1N7 401 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 TUBAL3A6NHL2 446 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 CRISP2P16562 243 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 GZMKP49863 264 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 MAP1LC3CQ9BXW4 147 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 VSIG4Q9Y279 399 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 MFNGO00587 321 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 GABRG2P18507 467 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 OR8B3Q8NGG8 313 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 TSPAN32Q96QS1 320 aa12.68□□□□□ -0.38
CUX2-201ENST00000261726 OR8B2Q96RD0 313 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms