RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 Q8NA96 180 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR6K6Q8NGW6 343 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 ABHD3Q8WU67 409 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 BSCL2Q96G97 398 aaPredicted RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 SLC25A44Q96H78 314 aaPredicted RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 PRDM14Q9GZV8 571 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 STEAP1Q9UHE8 339 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 MCTS1Q9ULC4 181 aaKnown RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 ITPR1Q14643 2758 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 DLEU1O43261 78 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 SYNGR4O95473 234 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 SNRPCP09234 159 aaKnown RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 TMIGD3P0DMS9 266 aaPredicted RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 GNG10P50151 68 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 SCGB2B2Q4G0G5 96 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 OR13D1Q8NGV5 346 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 LYPD6BQ8NI32 183 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 FNDC9Q8TBE3 224 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 RNF128Q8TEB7 428 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZMYND19Q96E35 227 aaPredicted RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 ADAD1Q96M93 576 aaKnown RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 MRPL13Q9BYD1 178 aaKnown RBP16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 NMES1Q9C002 83 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 PRORYQ9H606 182 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 SPACA1Q9HBV2 294 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 STARD10Q9Y365 291 aa16.48■□□□□ 0.23
COL4A3BP-201ENST00000261415 SMCO3A2RU48 225 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 FAM171A2A8MVW0 826 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 WNT11O96014 354 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 IGHG1P01857 330 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 PGA4P0DJD7 388 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 PGA3P0DJD8 388 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZBTB25P24278 435 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 RASGEF1BQ0VAM2 473 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 AKR1C8PQ5T2L2 129 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 LINC01590Q5TEZ4 76 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF529Q6P280 563 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 FAM180AQ6UWF9 173 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 STAC2Q6ZMT1 411 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZIC4Q8N9L1 334 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ALG12Q9BV10 488 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZGRF1Q86YA3 2104 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 A0A1B0GTH9 108 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 TAAR5O14804 337 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNHIT1O43257 154 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 IL2RAP01589 272 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 CTLA4P16410 223 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 IL2RGP31785 369 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 FMODQ06828 376 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 GGTLC2Q14390 218 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 SLC25A42Q86VD7 318 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 HSD17B11Q8NBQ5 300 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 NOXO1Q8NFA2 376 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 GPX8Q8TED1 209 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 DVL3Q92997 716 aaPredicted RBP16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 SARAFQ96BY9 339 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 ATG101Q9BSB4 218 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 B9D1Q9UPM9 204 aa16.47■□□□□ 0.23
COL4A3BP-201ENST00000261415 SLC16A7O60669 478 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 AMY2AP04746 511 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 SFTPBP07988 381 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 METTL15P1P0C7V9 234 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 CX3CR1P49238 355 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 CLRN1P58418 232 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 UBE2V2Q15819 145 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 FAHD2BQ6P2I3 314 aaPredicted RBP16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 FAHD2AQ96GK7 314 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 C20orf24Q9BUV8 137 aa16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 ZNF107Q9UII5 783 aaPredicted RBP16.46■□□□□ 0.23
COL4A3BP-201ENST00000261415 IGLV1-36A0A0B4J1U3 117 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 DVL1O14640 695 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 PHOX2AO14813 284 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BKO60814 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 CTAG2O75638 210 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BJP06899 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 SOD3P08294 240 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BOP23527 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BBP33778 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BDP58876 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BCP62807 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST2H2BEQ16778 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 CARD17Q5XLA6 110 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BHQ93079 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZNF775Q96BV0 537 aaPredicted RBP16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 PACRGQ96M98 296 aaPredicted RBP16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BNQ99877 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 HIST1H2BMQ99879 126 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 PRRG4Q9BZD6 226 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 SLCO5A1Q9H2Y9 848 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 GNG8Q9UK08 70 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 ACACBO00763 2458 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 PKD1L2Q7Z442 2459 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 NBEAQ8NFP9 2946 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 TRAV18A0A075B6X5 111 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 EEF1E1-BLOC1S5C9J1V9 151 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 UMAD1C9J7I0 102 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 ZNF432O94892 652 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 SERPINA5P05154 406 aa16.45■□□□□ 0.22
COL4A3BP-201ENST00000261415 FABP4P15090 132 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms