RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 GNG13Q9P2W3 67 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 NOSIPQ9Y314 301 aaKnown RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 CCDC187A0A096LP49 1063 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 C5orf49A4QMS7 147 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SYNGR4O95473 234 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 MBPP02686 304 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 CSRP1P21291 193 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 AADACP22760 399 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 HOXA1P49639 335 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 NOVA1P51513 510 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 GPM6AP51674 278 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SUPT4H1P63272 117 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 HMGN3Q15651 99 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 CLEC12BQ2HXU8 276 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 HFEQ30201 348 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 AADACL3Q5VUY0 350 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 DNM1P46Q6ZS02 220 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 ZNF561Q8N587 486 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 POC1AQ8NBT0 407 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR1J1Q8NGS3 322 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 POC1BQ8TC44 478 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SPSB1Q96BD6 273 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 HS3ST6Q96QI5 342 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 PFDN5Q99471 154 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 FOXB1Q99853 325 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 NIPSNAP3BQ9BS92 247 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SH3BGRL3Q9H299 93 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 ROS1P08922 2347 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 MYO7BQ6PIF6 2116 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 TRIOO75962 3097 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 A0A0J9YW62 118 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 FAM166BA8MTA8 275 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 ADAM20O43506 726 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 GPR137BO60478 399 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 IAPPP10997 89 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SULT1A2P50226 295 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 ELLP55199 621 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 PCBD1P61457 104 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 LSM6P62312 80 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 NKX6-1P78426 367 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 LINC00696Q6ZRV3 163 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 WDR5BQ86VZ2 330 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 THNSL2Q86YJ6 484 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR2C3Q8N628 320 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 ZNF611Q8N823 705 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR52M1Q8NGK5 317 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR5C1Q8NGR4 320 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 CPT1CQ8TCG5 803 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 EXTL1Q92935 676 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 WBP1Q96G27 269 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 MRPL13Q9BYD1 178 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 PISDQ9UG56 409 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 TIMM10BQ9Y5J6 103 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 TRAV39A0A0B4J263 110 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 IGHV5-10-1A0A0J9YXX1 117 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 NKX2-6A6NCS4 301 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 CD300LBA8K4G0 201 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 WDR1O75083 606 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP44-201ENST00000258499 MT-ND4LP03901 98 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 FUT3P21217 361 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 S100PP25815 95 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 PPP1CCP36873 323 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 DSCR4P56555 118 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 CLDN15P56746 228 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 RUNX1Q01196 453 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 TSC22D1Q15714 1073 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 HLA-BQ31612 363 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 IGSF11Q5DX21 431 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR2B11Q5JQS5 317 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 WDR74Q6RFH5 385 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 RBMS3Q6XE24 437 aaKnown RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 LHFPL2Q6ZUX7 228 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SLC35G3Q8N808 338 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 WDSUB1Q8N9V3 476 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR56B2PQ8NGI1 322 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 ABHD3Q8WU67 409 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 MRGPRFQ96AM1 343 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SUCNR1Q9BXA5 334 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 UBE2ZQ9H832 354 aaPredicted RBP4.14□□□□□ -1.75
USP44-201ENST00000258499 ZNF581Q9P0T4 197 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OR14J1Q9UGF5 321 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 OSGIN2Q9Y236 505 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SIT1Q9Y3P8 196 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SZT2Q5T011 3432 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SPTA1P02549 2419 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 SPEGQ15772 3267 aa4.14□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PNV4 684 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PQM1 296 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 PDCD6O75340 191 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 DEDDO75618 318 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 CBR3O75828 277 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 IFNA4P05014 189 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 FABP1P07148 127 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 FCGR3AP08637 254 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 HLA-GP17693 338 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ACKR3P25106 362 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 ALDH3B1P43353 468 aa4.13□□□□□ -1.75
USP44-201ENST00000258499 SULT1A1P50225 295 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms