RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 SLC35D2Q76EJ3 337 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 LRRC28Q86X40 367 aaPredicted RBP4.1□□□□□ -1.75
TCN1-201ENST00000257264 C2orf73Q8N5S3 287 aaPredicted RBP4.1□□□□□ -1.75
TCN1-201ENST00000257264 OR4D11Q8NGI4 311 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 OR4D6Q8NGJ1 314 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 OR5D16Q8NGK9 328 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 OR6T1Q8NGN1 323 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 OR52P1PQ8NH57 321 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 ZNF519Q8TB69 540 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 ISOC2Q96AB3 205 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 APH1AQ96BI3 265 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 HYLS1Q96M11 299 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 PRAP1Q96NZ9 151 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 MS4A4EQ96PG1 132 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 ARHGDIGQ99819 225 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 ATF6BQ99941 703 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 MARVELD1Q9BSK0 173 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 TMED9Q9BVK6 235 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 TM2D1Q9BX74 207 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 ZNF717Q9BY31 904 aaPredicted RBP4.1□□□□□ -1.75
TCN1-201ENST00000257264 HDHD2Q9H0R4 259 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 LINC00597Q9H2U6 94 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 MIXL1Q9H2W2 232 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 COPZ2Q9P299 210 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 NUFIP1Q9UHK0 495 aaKnown RBP4.1□□□□□ -1.75
TCN1-201ENST00000257264 KIF25Q9UIL4 384 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 SPATA2Q9UM82 520 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 NDRG2Q9UN36 371 aaKnown RBP4.1□□□□□ -1.75
TCN1-201ENST00000257264 HEBP2Q9Y5Z4 205 aa4.1□□□□□ -1.75
TCN1-201ENST00000257264 LTBP2Q14767 1821 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 DENND4AQ7Z401 1863 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 MYOFQ9NZM1 2061 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 A0A087WUU8 490 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 A0A1B0GWB2 263 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 CPSF4LA6NMK7 179 aaKnown RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 INMT-MINDY4F8WBC2 141 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 BUB3O43684 328 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 GMDSO60547 372 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 NOS1APO75052 506 aaPredicted RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 SCRG1O75711 98 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR2B3O76000 313 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 RCBTB2O95199 551 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 HMGN2P05204 90 aaKnown RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 CISD3P0C7P0 127 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 LIMS3P0CW19 117 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 LIMS4P0CW20 117 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 CELP19835 753 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 HIST1H1TP22492 207 aaPredicted RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 TEAD1P28347 426 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 CMPK1P30085 196 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 CCR2P41597 374 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR1D4P47884 311 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 CSNK1G2P78368 415 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 PRDX1Q06830 199 aaKnown RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 KRTAP1-1Q07627 177 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 SIGLEC14Q08ET2 396 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 ZNF146Q15072 292 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 PGGHGQ32M88 737 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 HBMQ6B0K9 141 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 FAM53AQ6NSI3 398 aaPredicted RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 SLC48A1Q6P1K1 146 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 MBOAT2Q6ZWT7 520 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 LHFPL3Q86UP9 236 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 ZNF547Q8IVP9 402 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 C17orf78Q8N4C9 275 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 EID2Q8N6I1 236 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 ACBD7Q8N6N7 88 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 YIPF7Q8N8F6 280 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 ACOT4Q8N9L9 421 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR2L5Q8NG80 312 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR10H4Q8NGA5 316 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR2L8Q8NGY9 312 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR56B4Q8NH76 319 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 DEDD2Q8WXF8 326 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 TCEAL4Q96EI5 215 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 MRPL48Q96GC5 212 aaKnown RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 COX14Q96I36 57 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 GMPPAQ96IJ6 420 aaPredicted RBP4.09□□□□□ -1.75
TCN1-201ENST00000257264 RNF170Q96K19 258 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR7D2Q96RA2 312 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 OR8B4Q96RC9 309 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 MCHR1Q99705 422 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 SOSTQ9BQB4 213 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 MED28Q9H204 178 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 IL20Q9NYY1 176 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 DEC1Q9P2X7 70 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 ALG5Q9Y673 324 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 CDH10Q9Y6N8 788 aa4.09□□□□□ -1.75
TCN1-201ENST00000257264 PLXND1Q9Y4D7 1925 aa4.09□□□□□ -1.76
TCN1-201ENST00000257264 LRRK1Q38SD2 2015 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 DAPL1A0PJW8 107 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 MEX3AA1L020 520 aaKnown RBP4.08□□□□□ -1.76
TCN1-201ENST00000257264 DNAJC9-AS1A6NH13 148 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 DCTN6O00399 190 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 PLA2G10O15496 165 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 ERI3O43414 337 aaKnown RBP4.08□□□□□ -1.76
TCN1-201ENST00000257264 ZNF780AO75290 641 aaPredicted RBP4.08□□□□□ -1.76
TCN1-201ENST00000257264 LALBAP00709 142 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 NPR2P20594 1047 aa4.08□□□□□ -1.76
TCN1-201ENST00000257264 SLC2A5P22732 501 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms