RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ASCC1Q8N9N2 400 aaKnown RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 SLC7A6OSQ96CW6 309 aaPredicted RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 CEP19Q96LK0 163 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 ZNF714Q96N38 554 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 NKX3-1Q99801 234 aaPredicted RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 CITED2Q99967 270 aaPredicted RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 CADM1Q9BY67 442 aaKnown RBP8.28□□□□□ -1.08
VPS50-201ENST00000251739 PRRG3Q9BZD7 231 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 PITPNC1Q9UKF7 332 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 GTF2A1LQ9UNN4 478 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 SLC22A13Q9Y226 551 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 POMPQ9Y244 141 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 LINC00312Q9Y6C7 94 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 MINOS1-NBL1R4GNA1 71 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 STAB2Q8WWQ8 2551 aa8.28□□□□□ -1.08
VPS50-201ENST00000251739 MEX3AA1L020 520 aaKnown RBP8.27□□□□□ -1.09
VPS50-201ENST00000251739 ZNF670-ZNF695F2Z2N8 137 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 ARG1P05089 322 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 CHRM2P08172 466 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 ADMP35318 185 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 ACTR3P61158 418 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 EMX1Q04741 257 aaPredicted RBP8.27□□□□□ -1.09
VPS50-201ENST00000251739 ZNF91Q05481 1191 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 TMEM95Q3KNT9 176 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 DNAL1Q4LDG9 190 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 KDM4DQ6B0I6 523 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 GID4Q8IVV7 300 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 WFDC9Q8NEX5 89 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 OR4S1Q8NGB4 309 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 OR52N4Q8NGI2 321 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 OR4P4Q8NGL7 312 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 TRMT10AQ8TBZ6 339 aaKnown RBP8.27□□□□□ -1.09
VPS50-201ENST00000251739 PHF21AQ96BD5 680 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 R3HDM4Q96D70 268 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 SNX22Q96L94 193 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 PRSS22Q9GZN4 317 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 GABARAPL1Q9H0R8 117 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 NECAP2Q9NVZ3 263 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 IL36RNQ9UBH0 155 aa8.27□□□□□ -1.09
VPS50-201ENST00000251739 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS50-201ENST00000251739 IGHV2-26A0A0B4J1V2 119 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 PSPNO60542 156 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 KRT8P05787 483 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 EDDM3BP56851 147 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ACTA2P62736 377 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 BLCAPP62952 87 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ACTG2P63267 376 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ACTC1P68032 377 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ACTA1P68133 377 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 CD83Q01151 205 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ZNF146Q15072 292 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ATP6AP1Q15904 470 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 SLC25A26Q70HW3 274 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 GDPD3Q7L5L3 318 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 PRSS35Q8N3Z0 413 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 CCDC54Q8NEL0 328 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 OR4F17Q8NGA8 305 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 SLAMF9Q96A28 289 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 OR4F4Q96R69 305 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 IL4I1Q96RQ9 567 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 ABCB10Q9NRK6 738 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 KRT84Q9NSB2 600 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 AURKAIP1Q9NWT8 199 aaPredicted RBP8.26□□□□□ -1.09
VPS50-201ENST00000251739 WARS2Q9UGM6 360 aaKnown RBP8.26□□□□□ -1.09
VPS50-201ENST00000251739 SESN1Q9Y6P5 492 aa8.26□□□□□ -1.09
VPS50-201ENST00000251739 IGKV1-9A0A0C4DH69 117 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 TRBV2A0A0J9YWF9 115 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 LOC107986453A0A1B0GWG9 222 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 FAM230AA0A1W2PPH8 454 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 A0A1W2PQL4 384 aaPredicted RBP8.25□□□□□ -1.09
VPS50-201ENST00000251739 hADV38S2A0JD32 116 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 F2RL2O00254 374 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 SYT7O43581 403 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 GATBO75879 557 aaKnown RBP8.25□□□□□ -1.09
VPS50-201ENST00000251739 SULT1C4O75897 302 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 MMP23AO75900 390 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 RPP14O95059 124 aaKnown RBP8.25□□□□□ -1.09
VPS50-201ENST00000251739 HAND1O96004 215 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 OR2T7P0C7T2 308 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 AZGP1P25311 298 aaKnown RBP8.25□□□□□ -1.09
VPS50-201ENST00000251739 KIR3DL2P43630 455 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 OR3A1P47881 315 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 FUT6P51993 359 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 LOXL3P58215 753 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 TCTEX1D4Q5JR98 221 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 Q8IYB0 196 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 TPRX1Q8N7U7 411 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 YIPF7Q8N8F6 280 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 DNAAF1Q8NEP3 725 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 PP6455Q8WZ26 134 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 C10orf35Q96D05 121 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 TMEM133Q9H2Q1 129 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 PLEKHA1Q9HB21 404 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 RBFOX1Q9NWB1 397 aaKnown RBP8.25□□□□□ -1.09
VPS50-201ENST00000251739 SLC7A11Q9UPY5 501 aa8.25□□□□□ -1.09
VPS50-201ENST00000251739 METTL15A6NJ78 407 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 MGST3O14880 152 aa8.24□□□□□ -1.09
VPS50-201ENST00000251739 GYG2O15488 501 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms