RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 REEP1Q9H902 201 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 EDA2RQ9HAV5 297 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 MTCH1Q9NZJ7 389 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 HHLA2Q9UM44 414 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 GTF2A1LQ9UNN4 478 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 LINC00312Q9Y6C7 94 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 SMAD5-AS1Q9Y6J3 95 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 MUC4Q99102 2169 aa6.58□□□□□ -1.36
IFT43-201ENST00000238628 FAM230AA0A1W2PPH8 454 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 ARRDC5A6NEK1 342 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 F8VVB4 439 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 F8VWA3 439 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 TOR1AO14656 332 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 PRODHO43272 600 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 ZNF254O75437 659 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 TTRP02766 147 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 FAM106CPP0CH98 169 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 MYF6P23409 242 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 GABRR1P24046 479 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 CEACAM3P40198 252 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 ECI1P42126 302 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 OR3A4PP47883 348 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 RAB25P57735 213 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 BDH1Q02338 343 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 GRK1Q15835 563 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 SNAPC1Q16533 368 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 ZNF829Q3KNS6 432 aaPredicted RBP6.57□□□□□ -1.36
IFT43-201ENST00000238628 SLC35D3Q5M8T2 416 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 SLX4IPQ5VYV7 408 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 OR2T5Q6IEZ7 315 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 CD300LDQ6UXZ3 194 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 CYP2R1Q6VVX0 501 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 OR2W3Q7Z3T1 314 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 ZNF679Q8IYX0 411 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 KLHL30-AS1Q8NEE0 82 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 OR10G2Q8NGC3 310 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 OR14K1Q8NGZ2 314 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 OR2T29Q8NH02 315 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 TRMT10AQ8TBZ6 339 aaKnown RBP6.57□□□□□ -1.36
IFT43-201ENST00000238628 CHPT1Q8WUD6 406 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 CREB3L1Q96BA8 519 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 CEP19Q96LK0 163 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 DUX3Q96PT4 197 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 YIPF3Q9GZM5 350 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 CHST6Q9GZX3 395 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 DNAJB9Q9UBS3 223 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 NUFIP1Q9UHK0 495 aaKnown RBP6.57□□□□□ -1.36
IFT43-201ENST00000238628 GLS2Q9UI32 602 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 SLC7A11Q9UPY5 501 aa6.57□□□□□ -1.36
IFT43-201ENST00000238628 UBE2J1Q9Y385 318 aaPredicted RBP6.57□□□□□ -1.36
IFT43-201ENST00000238628 SAMHD1Q9Y3Z3 626 aaKnown RBP6.57□□□□□ -1.36
IFT43-201ENST00000238628 FAM172BPA6NC97 362 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 SERPINE3A8MV23 424 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 BUB1B-PAK6H3BSN5 160 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 E2F6O75461 281 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 LY6G6CO95867 125 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 HAND1O96004 215 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 IGLV1-47P01700 117 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 IGHA1P01876 353 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 HMGN1P05114 100 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 SNRNP70P08621 437 aaKnown RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 CDK2P24941 298 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 MNDAP41218 407 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 MAGEA2P43356 314 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 VEGFCP49767 419 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 RIDAP52758 137 aaKnown RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 PRRX1P54821 245 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 SLC35B1P78383 322 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 MFGE8Q08431 387 aaPredicted RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 KPNB1Q14974 876 aaKnown RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 TPTE2P1Q5T6R2 138 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 PRAMEF5Q5TYX0 476 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 BAIAP2L2Q6UXY1 529 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 OVCH2Q7RTZ1 564 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 ZNF695Q8IW36 515 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 ENTHD1Q8IYW4 607 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 PGAM4Q8N0Y7 254 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 BBS1Q8NFJ9 593 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 GIPC3Q8TF64 312 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 EMG1Q92979 244 aaKnown RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 SLAMF9Q96A28 289 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 NOL4LQ96MY1 436 aaPredicted RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 FEVQ99581 238 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 CADM1Q9BY67 442 aaKnown RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 TTTY10Q9BZA0 68 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 GAL3ST2Q9H3Q3 398 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 CCDC134Q9H6E4 229 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 SEBOXQ9HB31 216 aaPredicted RBP6.56□□□□□ -1.36
IFT43-201ENST00000238628 LINC00527Q9UJ94 153 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 IKZF2Q9UKS7 526 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 MOB4Q9Y3A3 225 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 HSPE1-MOB4S4R3N1 261 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 V9GYS6 101 aa6.56□□□□□ -1.36
IFT43-201ENST00000238628 A0A1B0GTI1 187 aa6.55□□□□□ -1.36
IFT43-201ENST00000238628 PRR32B1ATL7 298 aa6.55□□□□□ -1.36
IFT43-201ENST00000238628 LOC110117498-PIK3R3F6TDL0 507 aa6.55□□□□□ -1.36
IFT43-201ENST00000238628 CCL24O00175 119 aa6.55□□□□□ -1.36
IFT43-201ENST00000238628 MGST3O14880 152 aa6.55□□□□□ -1.36
IFT43-201ENST00000238628 PSPNO60542 156 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms