RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ST6GALNAC5Q9BVH7 336 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.37
CCDC47-201ENST00000225726 PRRC2CQ9Y520 2896 aaKnown RBP12.71□□□□□ -0.38
CCDC47-201ENST00000225726 LRP5LA4QPB2 252 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 SNU13P55769 128 aaKnown RBP12.71□□□□□ -0.38
CCDC47-201ENST00000225726 TAS2R46P59540 309 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF718Q3SXZ3 478 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF626Q68DY1 528 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 OR8H3Q8N146 312 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 OR8G5Q8NG78 346 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 OR5H2Q8NGV7 314 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 RADILQ96JH8 1075 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 SULT4A1Q9BR01 284 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 ALX4Q9H161 411 aaPredicted RBP12.71□□□□□ -0.38
CCDC47-201ENST00000225726 RHOFQ9HBH0 211 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 HSPB11Q9Y547 144 aa12.71□□□□□ -0.38
CCDC47-201ENST00000225726 DMXL2Q8TDJ6 3036 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 TMEM82A0PJX8 343 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 M0R1B8 84 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 CREBL2O60519 120 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 SULT1A3P0DMM9 295 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 SULT1A4P0DMN0 295 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 FUT3P21217 361 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 DTYMKP23919 212 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 OR11H7Q8NGC8 314 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 CCDC107Q8WV48 283 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 AIFM2Q9BRQ8 373 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 PLK3Q9H4B4 646 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 SH3BGRL2Q9UJC5 107 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 CDK10Q15131 360 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 OR8G1Q15617 311 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 FAM76BQ5HYJ3 339 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 ARRDC1Q8N5I2 433 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 CMSS1Q9BQ75 279 aaKnown RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 EDARQ9UNE0 448 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 LAMA5O15230 3695 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 GCH1P30793 250 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 DAZAP2Q15038 168 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 LINC00596Q86U02 117 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 SLC51BQ86UW2 128 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 ZDHHC22Q8N966 263 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 ZCCHC14Q8WYQ9 949 aaKnown RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 TMEM100Q9NV29 134 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF701Q9NV72 531 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 JKAMPQ9P055 326 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF69Q9UC07 566 aa12.7□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF230Q9UIE0 474 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-201ENST00000225726 RAB19A4D1S5 217 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 TMEM210A6NLX4 147 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 MPV17LQ2QL34 196 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 MARC2Q969Z3 335 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
CCDC47-201ENST00000225726 F8VVB4 439 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 F8VWA3 439 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 ATPAF1Q5TC12 328 aaPredicted RBP12.69□□□□□ -0.38
CCDC47-201ENST00000225726 WDR86Q86TI4 376 aa12.69□□□□□ -0.38
CCDC47-201ENST00000225726 HDHD3Q9BSH5 251 aaPredicted RBP12.69□□□□□ -0.38
CCDC47-201ENST00000225726 TIMM8AO60220 97 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-201ENST00000225726 OR7C1O76099 320 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-201ENST00000225726 OR5AP2Q8NGF4 316 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 CTRB1P17538 263 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 CHRFAM7AQ494W8 412 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 TMEM211Q6ICI0 200 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 RELL2Q8NC24 303 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-201ENST00000225726 MAFIPQ8WZ33 124 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 MRGPRFQ96AM1 343 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 ZNF222Q9UK12 451 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 VSIG4Q9Y279 399 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 POLDIP2Q9Y2S7 368 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 FCGR3AP08637 254 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 ANXA3P12429 323 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 IL13RA2Q14627 380 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 PDCD1Q15116 288 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-201ENST00000225726 TMEM17Q86X19 198 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 SCCPDHQ8NBX0 429 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
CCDC47-201ENST00000225726 RCC2Q9P258 522 aaKnown RBP12.68□□□□□ -0.38
CCDC47-201ENST00000225726 MEIKINA0A087WXM9 373 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 UBE2QL1A1L167 161 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 OR2AT4A6NND4 320 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 CRYAAP02489 173 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 CCKARP32238 428 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 NOXA1Q86UR1 476 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 LIX1LQ8IVB5 337 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 Q8IYB0 196 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 FAM58AQ8N1B3 248 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 DMRTA2Q96SC8 542 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 BSNQ9UPA5 3926 aa12.67□□□□□ -0.38
CCDC47-201ENST00000225726 H0YL77 283 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms