RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
SFXN3-201ENST00000224807 PLEK2Q9NYT0 353 aa12.54□□□□□ -0.4
SFXN3-201ENST00000224807 ZNF17P17021 662 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 CLDN17P56750 224 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
SFXN3-201ENST00000224807 SLC38A9Q8NBW4 561 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 FRG2CA6NGY1 282 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 OR7C1O76099 320 aaPredicted RBP12.53□□□□□ -0.4
SFXN3-201ENST00000224807 ZNF43P17038 809 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 P2RY1P47900 373 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 STARD6P59095 220 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 HERV-K104P61576 105 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 LYPD6Q86Y78 171 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 PLPP5Q8NEB5 264 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 PTX4Q96A99 478 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 TAAR9Q96RI9 348 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 A6NIZ1 184 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
SFXN3-201ENST00000224807 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 FUT3P21217 361 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 ELLP55199 621 aaPredicted RBP12.53□□□□□ -0.4
SFXN3-201ENST00000224807 RAP1BP61224 184 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 TESK1Q15569 626 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 OR8G1Q15617 311 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
SFXN3-201ENST00000224807 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 LGI3Q8N145 548 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 ARHGEF39Q8N4T4 335 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 OR10AD1Q8NGE0 317 aa12.53□□□□□ -0.4
SFXN3-201ENST00000224807 DOCK11Q5JSL3 2073 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 SCGNO76038 276 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 CCNOP22674 350 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 ADIRFQ15847 76 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 TMEM37Q8WXS4 190 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 IL23AQ9NPF7 189 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 P4HTMQ9NXG6 502 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 PPP4R1LQ9P1A2 415 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 ANXA10Q9UJ72 324 aa12.52□□□□□ -0.4
SFXN3-201ENST00000224807 C2orf16Q68DN1 1984 aa12.52□□□□□ -0.41
SFXN3-201ENST00000224807 SHISA7A6NL88 538 aa12.52□□□□□ -0.41
SFXN3-201ENST00000224807 TMEM267Q0VDI3 215 aaPredicted RBP12.52□□□□□ -0.41
SFXN3-201ENST00000224807 FZD2Q14332 565 aa12.52□□□□□ -0.41
SFXN3-201ENST00000224807 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.41
SFXN3-201ENST00000224807 PRR18Q8N4B5 295 aa12.52□□□□□ -0.41
SFXN3-201ENST00000224807 METTL7AQ9H8H3 244 aa12.52□□□□□ -0.41
SFXN3-201ENST00000224807 IGHV3-64DA0A0J9YX35 117 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 HSD17B6O14756 317 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 TCAPO15273 167 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 GPR137BO60478 399 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 CD55P08174 381 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 ZNF16P17020 682 aaPredicted RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 CSNK1A1P48729 337 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 DYNLT3P51808 116 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 LBX1P52954 281 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 OR14L1PQ8NHC6 308 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 TMEM234Q8WY98 164 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 FAM131CQ96AQ9 280 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 TP53RKQ96S44 253 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 LMAN1LQ9HAT1 526 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 PLEKHA2Q9HB19 425 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 KIR2DS5A0A0G2JLQ3 304 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 A0A0G2JNG1 304 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 IGSF23A1L1A6 192 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 KIR2DS3K7RE56 304 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 IDH3GP51553 393 aaPredicted RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 HSD11B2P80365 405 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 IL15RAQ13261 267 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 KIR2DS5Q14953 304 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 ZNF695Q8IW36 515 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 OR2C3Q8N628 320 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 ABHD5Q8WTS1 349 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 GTF3AQ92664 365 aaKnown RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 RSG1Q9BU20 258 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 LRRC61Q9BV99 259 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 ZNF665Q9H7R5 613 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 IGHG1P01857 330 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 FOSL2P15408 326 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 CD33P20138 364 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 FBLP22087 321 aaKnown RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 NKX2-1P43699 371 aaPredicted RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 ZNF41P51814 821 aaPredicted RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 OR1D5P58170 312 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 IGLV3-21P80748 117 aaPredicted RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 FBXL14Q8N1E6 418 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 TMEM171Q8WVE6 324 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 RPUSD4Q96CM3 377 aaKnown RBP12.51□□□□□ -0.41
SFXN3-201ENST00000224807 NKX2-4Q9H2Z4 354 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 NAA60Q9H7X0 242 aa12.51□□□□□ -0.41
SFXN3-201ENST00000224807 RP1L1Q8IWN7 2480 aaPredicted RBP12.5□□□□□ -0.41
SFXN3-201ENST00000224807 A0A0U1RQK1 487 aa12.5□□□□□ -0.41
SFXN3-201ENST00000224807 CEBPZOSA8MTT3 80 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms