RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SKA3Q8IX90 412 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 TMEM230Q96A57 120 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 Q96M66 194 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 DEFB127Q9H1M4 99 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 SLC2A9Q9NRM0 540 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF391Q9UJN7 358 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF407Q9C0G0 2248 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 WIPF3A6NGB9 483 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 RNASEK-C17orf49H0YIS7 233 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 IFNA5P01569 189 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 FCGR3AP08637 254 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF14P17017 642 aaPredicted RBP13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 CLN3Q13286 438 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 ZFP82Q8N141 532 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 UQCC1Q9NVA1 299 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 FBXO7Q9Y3I1 522 aa13.02□□□□□ -0.33
UBE2D4-201ENST00000222402 E9PLN8 166 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 KLF7O75840 302 aaPredicted RBP13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 SRPXP78539 464 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 IL34Q6ZMJ4 242 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 FAM173AQ9BQD7 235 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 OSGIN2Q9Y236 505 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 TRIOO75962 3097 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 H0YIZ8 118 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 DNPH1O43598 174 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 PRDX4Q13162 271 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 OR1C1Q15619 314 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 SPATA46Q5T0L3 261 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 TUSC5Q8IXB3 177 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 TAAR9Q96RI9 348 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 RCL1Q9Y2P8 373 aaKnown RBP13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 HLA-GP17693 338 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 CCL1P22362 96 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 NAAAQ02083 359 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 C3AR1Q16581 482 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 TMEM123Q8N131 208 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 OR10AD1Q8NGE0 317 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 SCGB1C1Q8TD33 95 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 C2CD4CQ8TF44 421 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 SLC25A31Q9H0C2 315 aa13.01□□□□□ -0.33
UBE2D4-201ENST00000222402 LOC102723996A0A087X1L8 192 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 SSSCA1O60232 199 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 AADACP22760 399 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 OR11L1Q8NGX0 322 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 AKR1E2Q96JD6 320 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 RNF126Q9BV68 326 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 OR14J1Q9UGF5 321 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 V9GYS6 101 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 KIR2DS1A0A191URI9 304 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 C1orf196B1AJZ1 125 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 SFTA3P0C7M3 94 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 NAT2P11245 290 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 KIR2DS4P43632 304 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 KIR2DS1Q14954 304 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 PUSL1Q8N0Z8 303 aaKnown RBP13□□□□□ -0.33
UBE2D4-201ENST00000222402 FANCFQ9NPI8 374 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 SPTBN2O15020 2390 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 IGKV1D-8A0A087WSZ0 117 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 TMEM265A0A087WTH1 108 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 MSTNO14793 375 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 EDN3P14138 238 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 CD46P15529 392 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 MPLP40238 635 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 STX12Q86Y82 276 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF175Q9Y473 711 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 PUS1Q9Y606 427 aaKnown RBP eCLIP13□□□□□ -0.33
UBE2D4-201ENST00000222402 SZT2Q5T011 3432 aa13□□□□□ -0.33
UBE2D4-201ENST00000222402 OR13C7P0DN81 318 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 DTYMKP23919 212 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 SLC7A10Q9NS82 523 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 TRAPPC2LQ9UL33 140 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 EML5Q05BV3 1969 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 FER1L5A0AVI2 2057 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 ONECUT2O95948 504 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 MPZP25189 248 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 SUCLG1P53597 346 aaKnown RBP12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 MIDNQ504T8 468 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 AADACL3Q5VUY0 350 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 SLC30A7Q8NEW0 376 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 APOBEC3DQ96AK3 386 aaPredicted RBP12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 C14orf79Q96F83 325 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 CST7O76096 145 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 MAGEA5P43359 124 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 FLI1Q01543 452 aaPredicted RBP12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 ZNF266Q14584 549 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 AVPI1Q5T686 147 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 PPP1R32Q7Z5V6 425 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 CNEP1R1Q8N9A8 125 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 DMRTA2Q96SC8 542 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 FN3KRPQ9HA64 309 aa12.99□□□□□ -0.33
UBE2D4-201ENST00000222402 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 CDK2AP1O14519 115 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 GLAP06280 429 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 CD37P11049 281 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 H3F3AP84243 136 aa12.98□□□□□ -0.33
UBE2D4-201ENST00000222402 COL19A1Q14993 1142 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms