RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 C17orf107Q6ZR85 190 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 Q6ZS49 121 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 DHRS9Q9BPW9 319 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 C12orf4Q9NQ89 552 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 URB1O60287 2271 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 GOSR2O14653 212 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 SYNGR1O43759 233 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 SLC22A5O76082 557 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 OR7C1O76099 320 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 AGFG2O95081 481 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 DUS4LO95620 317 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 GLAP06280 429 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 CD34P28906 385 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 PSG7Q13046 419 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 IL13RA2Q14627 380 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 TMEM128Q5BJH2 165 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 TIMM23BQ5SRD1 257 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF660Q6AZW8 331 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 Q8NA96 180 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 KLF14Q8TD94 323 aaPredicted RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 CHIAQ9BZP6 476 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 C5orf66Q9H5L9 145 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 SPACA1Q9HBV2 294 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 LUZP4Q9P127 313 aa12.23□□□□□ -0.45
RTFDC1-201ENST00000023939 A0A0B4J2A0 478 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 F8VVB4 439 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 F8VWA3 439 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 ACAA1P09110 424 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 PPP3CBP16298 524 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 KITLGP21583 273 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 NPY4RP50391 375 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 UCNP55089 124 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 ARPC4P59998 168 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 IL13RA1P78552 427 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 NDUFA5Q16718 116 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 LY6G6FQ5SQ64 297 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 DHRS11Q6UWP2 260 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 ADAD2Q8NCV1 583 aaKnown RBP12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 SHPKQ9UHJ6 478 aa12.22□□□□□ -0.45
RTFDC1-201ENST00000023939 IGHV2OR16-5A0A0B4J2B6 119 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 IGHV1-18A0A0C4DH31 117 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 PLSCR5A0PG75 271 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 TMEM210A6NLX4 147 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 GLI4P10075 376 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 CALCRP30988 508 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 ERVS71-1P61550 626 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 Q8IYB0 196 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 RPRMLQ8N4K4 120 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 EXTL1Q92935 676 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 TMEM230Q96A57 120 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 CCDC120Q96HB5 630 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 PHB2Q99623 299 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 RTBDNQ9BSG5 229 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF442Q9H7R0 627 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 ZNF286AQ9HBT8 521 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 GTF3C1Q12789 2109 aa12.21□□□□□ -0.45
RTFDC1-201ENST00000023939 A0A1B0GWJ7 208 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 OR5H14A6NHG9 310 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 DBX1A6NMT0 343 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 POM121CA8CG34 1229 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 ATP6V1G1O75348 118 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 NAPSAO96009 420 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 OR5H8P0DN80 308 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 MPV17P39210 176 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 ERVK11-1P61568 191 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 DCAF12L2Q5VW00 463 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 MBNL2Q5VZF2 373 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 WDR86Q86TI4 376 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 FAM58AQ8N1B3 248 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 GRPEL2Q8TAA5 225 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 C1QTNF6Q9BXI9 259 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 PIGMQ9H3S5 423 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 RIMS4Q9H426 269 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 PURGQ9UJV8 347 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 ZNF835Q9Y2P0 537 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 HMSDA8MTL9 139 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 PRRG2O14669 202 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 SIX6O95475 246 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 SFT2D2O95562 160 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 CD8AP01732 235 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 AKR1C4P17516 323 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 OPRM1P35372 400 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 LIN54Q6MZP7 749 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 C11orf88Q6PI97 169 aa12.2□□□□□ -0.46
RTFDC1-201ENST00000023939 ADAT1Q9BUB4 502 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms