RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Nipsnap2O55126 281 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Itln1O88310 313 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Hmx2P43687 273 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Reg2Q08731 173 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slc7a15Q50E62 488 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Usp22Q5DU02 525 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Nrsn2Q5HZK2 202 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fbxw20Q5U467 468 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Art1Q60935 325 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Smim12Q78RX3 92 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 DctdQ8K2D6 178 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mid1ip1Q9CQ20 182 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Nicn1Q9CQM0 213 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 AplfQ9D842 499 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 HcstQ9QUJ0 79 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Scgb1b15A0A087WP50 93 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 5430403G16RikD3Z5L4 667 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Nxpe5E0CX47 564 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 FiglaO55208 194 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Htr1bP28334 386 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 VtnP29788 478 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Atp4bP50992 294 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ArntP53762 791 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Wbp2P97765 261 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cd84Q18PI6 329 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 XylbQ3TNA1 551 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm2aQ60648 193 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Insm1Q63ZV0 521 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 DbhQ64237 622 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Thap4Q6P3Z3 569 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp799Q8BHK4 648 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Hes7Q8BKT2 225 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r8Q8R2C2 303 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ntng2Q8R4F1 589 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr794Q8VF26 320 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1389Q8VGX0 311 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Pnpla3Q91WW7 413 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Znf281Q99LI5 893 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r171Q9EPS6 316 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Nova1Q9JKN6 507 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm12666A2AMD0 254 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm13547A2ARC0 163 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sult2a1P52843 285 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fgf14P70379 247 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 GcgrQ61606 485 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 March1Q6NZQ8 289 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr43Q7TRX1 313 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr403Q7TRX2 313 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sez6Q7TSK2 991 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zdhhc25Q810M4 279 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Uqcc3Q8K2T4 89 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vmn1r62Q8R2C0 300 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Mic13Q8R404 119 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Dnmt3lQ9CWR8 421 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Plekha2Q9ERS5 425 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 P2ry4Q9JJS7 361 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Btnl10Q9JK39 275 aa8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Csnk1eQ9JMK2 416 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp964B2RR88 472 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm21818J3KMS6 170 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Socs1O35716 212 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 P01807 119 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ppp1cbP62141 327 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 PkiaP63248 76 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Cd300lbQ3U497 209 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Npy6rQ61212 371 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Glra1Q64018 457 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Peli1Q8C669 418 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Fam169bQ8CHT6 337 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr678Q8VG26 313 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ptov1Q91VU8 416 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 AjubaQ91XC0 547 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Tnfsf13Q9D777 241 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Dpep3Q9DA79 493 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Izumo1rQ9EQF4 244 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Clec1bQ9JL99 229 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr545Q9WU94 316 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr122W4VSP0 330 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Kntc1Q8C3Y4 2207 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Slc35d1A2AKQ0 355 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Zfp942B8JJA7 486 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Gm5286E0CXI6 357 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 E030030I06RikJ3QML9 246 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 GusbP12265 648 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Scd2P13011 358 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 H2-DMaP28078 261 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Sirt6P59941 334 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 HfeP70387 359 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 PilrbQ2YFS2 224 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Obox7Q4KL20 218 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Rnase11Q5GAM9 192 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Smim7Q5RKS2 75 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Vma21Q78T54 101 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Hnrnpa3Q8BG05 379 aaKnown RBP8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Yipf6Q8BR70 236 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 ShfQ8CG80 238 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 MetrnlQ8VE43 311 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr1431Q8VF59 312 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Olfr344Q8VFP9 309 aa8.3□□□□□ -1.08
Ccdc47-201ENSMUST00000002043 Ube2tQ9CQ37 204 aa8.3□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms