RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SLC22A6Q4U2R8 563 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 NHLRC3Q5JS37 347 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 FAM201AQ5SY85 155 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 FIP1L1Q6UN15 594 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 CLEC2AQ6UVW9 174 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 LRRC28Q86X40 367 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 OSR2Q8N2R0 312 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF525Q8N782 197 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 BOLLQ8N9W6 283 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 ACOT12Q8WYK0 555 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 FAM168AQ92567 244 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 EMG1Q92979 244 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 FOXC2Q99958 501 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 CST11Q9H112 138 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 WDR13Q9H1Z4 485 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 LIN7BQ9HAP6 207 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 CCDC59Q9P031 241 aaKnown RBP10.33□□□□□ -0.76
LINC00339-213ENST00000642137 NLKQ9UBE8 527 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 OR5V1Q9UGF6 321 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 SPATA2Q9UM82 520 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 ARID1AO14497 2285 aa10.33□□□□□ -0.76
LINC00339-213ENST00000642137 SPG11Q96JI7 2443 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 TMEM272A0A1B0GTI8 110 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 CRTAPO75718 401 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-213ENST00000642137 KNG1P01042 644 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 IGHV2-70P01814 119 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 PRKACAP17612 351 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 RAB6AP20340 208 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 CD80P33681 288 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 MDH2P40926 338 aaKnown RBP10.32□□□□□ -0.76
LINC00339-213ENST00000642137 BTG1P62324 171 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 IL13RA2Q14627 380 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF146Q15072 292 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 FAM189A2Q15884 450 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 CARTPTQ16568 116 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 CLEC12BQ2HXU8 276 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 SMIM21Q3B7S5 101 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 TMEM155Q4W5P6 130 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 SPIN3Q5JUX0 258 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 ATPAF1Q5TC12 328 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-213ENST00000642137 SHEQ5VZ18 495 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 SFRP4Q6FHJ7 346 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-213ENST00000642137 MZT2AQ6P582 158 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 BATF2Q8N1L9 274 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 MUC20Q8N307 709 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-213ENST00000642137 C10orf105Q8TEF2 133 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 AP3S1Q92572 193 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 CMTM3Q96MX0 182 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 DNAJB11Q9UBS4 358 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 ST3GAL6Q9Y274 331 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 WIPI2Q9Y4P8 454 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 ETV7Q9Y603 341 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 LRBAP50851 2863 aa10.32□□□□□ -0.76
LINC00339-213ENST00000642137 CRYBG3Q68DQ2 2970 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 A0A075B6Q4 140 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 A0A0B4J203 849 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 A0A1W2PP11 408 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 OR2AT4A6NND4 320 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 SH2D1BO14796 132 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF205O95201 554 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 MPIG6BO95866 241 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 PAHP00439 452 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 PSG2P11465 335 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 SNRPBP14678 240 aaKnown RBP10.31□□□□□ -0.76
LINC00339-213ENST00000642137 MGMTP16455 207 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 CPT2P23786 658 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 GMFBP60983 142 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 HOXA4Q00056 320 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-213ENST00000642137 UNC119Q13432 240 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 ZMYND11Q15326 602 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 ZNF404Q494X3 552 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 LINC00596Q86U02 117 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 TMEM104Q8NE00 496 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 C19orf18Q8NEA5 215 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 DEFB108BQ8NET1 73 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 ANGPTL6Q8NI99 470 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 SEH1LQ96EE3 360 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 URM1Q9BTM9 101 aaKnown RBP10.31□□□□□ -0.76
LINC00339-213ENST00000642137 TM2D1Q9BX74 207 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 DNTTIP1Q9H147 329 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 BANF2Q9H503 90 aa10.31□□□□□ -0.76
LINC00339-213ENST00000642137 CELSR2Q9HCU4 2923 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 IGHV3OR15-7A0A075B7D8 119 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A10PA6NDY2 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A18PA6NE21 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A16PA6NEW6 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A20PA6NIJ5 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A8PA6NJQ4 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A7PA6NKC0 464 aa10.3□□□□□ -0.76
LINC00339-213ENST00000642137 FAM90A22PA8MWA6 464 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms