RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 ABHD12Q8N2K0 398 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 OR1N2Q8NGR9 330 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF671Q8TAW3 534 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 DLX4Q92988 240 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ST6GALNAC6Q969X2 333 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ZBTB9Q96C00 473 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 RSRC1Q96IZ7 334 aaKnown RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 FAM110AQ9BQ89 295 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 NRIP2Q9BQI9 281 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 EBF4Q9BQW3 602 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 TMEM109Q9BVC6 243 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 NSRP1Q9H0G5 558 aaKnown RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 HIPK2Q9H2X6 1198 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 GNB4Q9HAV0 340 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ABCB9Q9NP78 766 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 COMMD3-BMI1R4GMX3 469 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 TMEM82A0PJX8 343 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 LEUTXA8MZ59 168 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF878C9JN71 531 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 BUB1B-PAK6H3BSN5 160 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 OVOL1O14753 267 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 SHOXO15266 292 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 FGF16O43320 207 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 SAP30O75446 220 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 DNAJC8O75937 253 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-226ENST00000640916 RENP00797 406 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 ELANEP08246 267 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 OR8U8P0C7N1 319 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 PSMB8P28062 276 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 KDELR2P33947 212 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 POU3F4P49335 361 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 EDDM3BP56851 147 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 ESRRGP62508 458 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 GNB1P62873 340 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 GNG3P63215 75 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 RUNX1Q01196 453 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 MEF2CQ06413 473 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-226ENST00000640916 SMIM21Q3B7S5 101 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 CEACAM21Q3KPI0 293 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 CEP78Q5JTW2 689 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 RNLSQ5VYX0 342 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 NANOGP8Q6NSW7 305 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 ACSM6Q6P461 480 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 HAGHLQ6PII5 290 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-226ENST00000640916 LINC00322Q6ZN03 302 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-226ENST00000640916 ZBTB49Q6ZSB9 765 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 TIGD4Q8IY51 512 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 BATF2Q8N1L9 274 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 TPRX1Q8N7U7 411 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 OR4C15Q8NGM1 316 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 TPD52L3Q96J77 140 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 PAIP2Q9BPZ3 127 aaKnown RBP6.23□□□□□ -1.41
SCARB2-226ENST00000640916 NDEL1Q9GZM8 345 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 OR14J1Q9UGF5 321 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 TMEM5Q9Y2B1 443 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 HERC1Q15751 4861 aa6.23□□□□□ -1.41
SCARB2-226ENST00000640916 A0A1B0GVY2 172 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 DHRS12A0PJE2 317 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 FAM172BPA6NC97 362 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 ARRDC5A6NEK1 342 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 UNC119BA6NIH7 251 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF593O00488 134 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-226ENST00000640916 BRI3O95415 125 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 IGHG4P01861 327 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 FAM106CPP0CH98 169 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 CFL1P23528 166 aaKnown RBP6.22□□□□□ -1.41
SCARB2-226ENST00000640916 CD34P28906 385 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 GPR12P47775 334 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 ERVK11-1P61568 191 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 GRB2P62993 217 aaKnown RBP6.22□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF616Q08AN1 781 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 IFFO1Q0D2I5 559 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 TAF13Q15543 124 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 HLA-DRB5Q30154 266 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 TEX30Q5JUR7 227 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 XP32Q5T750 250 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 MZT2BQ6NZ67 158 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 HAPLN4Q86UW8 402 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 CATSPERDQ86XM0 798 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 FOXRED2Q8IWF2 684 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 OR52N4Q8NGI2 321 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 OR51L1Q8NGJ5 315 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 OR6Q1Q8NGQ2 317 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 AMELYQ99218 206 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 FUZQ9BT04 418 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 ST6GALNAC5Q9BVH7 336 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 KLK15Q9H2R5 256 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF286AQ9HBT8 521 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 DNAJC27Q9NZQ0 273 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 SLC22A13Q9Y226 551 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 LINC00312Q9Y6C7 94 aa6.22□□□□□ -1.41
SCARB2-226ENST00000640916 PKD1P98161 4303 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 DNAH11Q96DT5 4516 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 A0A1W2PPI3 338 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 F8VVB4 439 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 F8VWA3 439 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 FXYD1O00168 92 aa6.21□□□□□ -1.42
SCARB2-226ENST00000640916 AP4M1O00189 453 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms