RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 STARD10Q9Y365 291 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 NKX2-8O15522 239 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 ZNF728P0DKX0 622 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 RPA2P15927 270 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 SELEP16581 610 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 GLP1RP43220 463 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 FOXO1Q12778 655 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 SLC38A6Q8IZM9 456 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 OR10AD1Q8NGE0 317 aa12.16□□□□□ -0.46
GFAP-237ENST00000640552 EMG1Q92979 244 aaKnown RBP12.16□□□□□ -0.46
GFAP-237ENST00000640552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
GFAP-237ENST00000640552 IGKV1-12A0A0C4DH73 117 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 A0A1B0GW55 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 IGKV1D-12P01611 117 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4L2P0CJ85 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4L3P0CJ86 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4L4P0CJ87 422 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4L5P0CJ88 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4L6P0CJ89 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4L7P0CJ90 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 ZNF44P15621 663 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 ZNF16P17020 682 aaPredicted RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 M6PRP20645 277 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 OMGP23515 440 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 MPPED2Q15777 294 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 RNASE11Q8TAA1 199 aaKnown RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 ESRP2Q9H6T0 727 aaKnown RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 DUX4Q9UBX2 424 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 ANXA10Q9UJ72 324 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 CDX4O14627 284 aaPredicted RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 PHF1O43189 567 aaPredicted RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 SFT2D2O95562 160 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 NME2P22392 152 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 SNTB1Q13884 538 aaKnown RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 TNFSF18Q9UNG2 199 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 LYZL6O75951 148 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 CD46P15529 392 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 CBX5P45973 191 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 TRIP6Q15654 476 aaKnown RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 RPUSD3Q6P087 351 aaKnown RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 CXorf67Q86X51 503 aaPredicted RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 ARPC5LQ9BPX5 153 aa12.15□□□□□ -0.46
GFAP-237ENST00000640552 ZNF703Q9H7S9 590 aaPredicted RBP12.15□□□□□ -0.46
GFAP-237ENST00000640552 ADAMTS20P59510 1910 aa12.15□□□□□ -0.47
GFAP-237ENST00000640552 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 ZNF705EA8MWA4 302 aaPredicted RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 IFNA2P01563 188 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 PRDX4Q13162 271 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 ACTBL2Q562R1 376 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 IGSF11Q5DX21 431 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 RTN4IP1Q8WWV3 396 aaPredicted RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 MRPL24Q96A35 216 aaKnown RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 RTBDNQ9BSG5 229 aaPredicted RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 V9GYS6 101 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 F8VVB4 439 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 F8VWA3 439 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 PRKACAP17612 351 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 BCL3P20749 454 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 CA6P23280 308 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 FPR2P25090 351 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 APLNRP35414 380 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 UBA52P62987 128 aaKnown RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 PDZK1IP1Q13113 114 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 CLN3Q13286 438 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 TMEM65Q6PI78 240 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 ZBTB44Q8NCP5 570 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 SPSB1Q96BD6 273 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 RRNAD1Q96FB5 475 aaKnown RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 SH2D2AQ9NP31 389 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 CRIM1Q9NZV1 1036 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 RNF222A6NCQ9 220 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 KLRC4-KLRK1H3BQV0 150 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 BCL2L11O43521 198 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 CCL1P22362 96 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 MPGP29372 298 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 PTGER4P35408 488 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 AADACL3Q5VUY0 350 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 JMJD6Q6NYC1 403 aaPredicted RBP12.14□□□□□ -0.47
GFAP-237ENST00000640552 LPCAT3Q6P1A2 487 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 OR6K3Q8NGY3 331 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 OR1S1Q8NH92 325 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 HS3ST6Q96QI5 342 aa12.14□□□□□ -0.47
GFAP-237ENST00000640552 OR2F2O95006 317 aa12.13□□□□□ -0.47
GFAP-237ENST00000640552 TBPP20226 339 aa12.13□□□□□ -0.47
GFAP-237ENST00000640552 OR2F1Q13607 317 aa12.13□□□□□ -0.47
GFAP-237ENST00000640552 SIGIRRQ6IA17 410 aa12.13□□□□□ -0.47
GFAP-237ENST00000640552 LHFPL2Q6ZUX7 228 aa12.13□□□□□ -0.47
GFAP-237ENST00000640552 ZNF565Q8N9K5 539 aa12.13□□□□□ -0.47
GFAP-237ENST00000640552 OR1S2Q8NGQ3 325 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms