RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	OPN1MW3	P0DN78	364 aa		12.37	□□□□□ -0.43
MED17-222	ENST00000640027	IGHV3-43D	P0DP04	118 aa		12.37	□□□□□ -0.43
MED17-222	ENST00000640027	OR3A1	P47881	315 aa		12.37	□□□□□ -0.43
MED17-222	ENST00000640027	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	12.37	□□□□□ -0.43	6e-7	■■■■□ 25.2
MED17-222	ENST00000640027	OR52L2P	Q8NGH6	319 aa		12.37	□□□□□ -0.43
MED17-222	ENST00000640027	ZMIZ1	Q9ULJ6	1067 aa		12.37	□□□□□ -0.43
MED17-222	ENST00000640027	TCRBV5S2	A0A599	114 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	TOX3	O15405	576 aa	Predicted RBP	12.36	□□□□□ -0.43
MED17-222	ENST00000640027	PRSS12	P56730	875 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	SSBP1	Q04837	148 aa	Known RBP	12.36	□□□□□ -0.43
MED17-222	ENST00000640027	FAM103A1	Q9BTL3	118 aa	Known RBP	12.36	□□□□□ -0.43
MED17-222	ENST00000640027	FAAP24	Q9BTP7	215 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	UCK1	Q9HA47	277 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	TMEM127	O75204	238 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	LIMK1	P53667	647 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027		Q1RN00	199 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	LINC00303	Q3SY05	128 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	FNDC7	Q5VTL7	733 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	ETV3L	Q6ZN32	361 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	RIMKLA	Q8IXN7	391 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	NHLRC2	Q8NBF2	726 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	MRGPRD	Q8TDS7	321 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	GABRG3	Q99928	467 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	DNAJB12	Q9NXW2	375 aa	Known RBP	12.36	□□□□□ -0.43
MED17-222	ENST00000640027	RCL1	Q9Y2P8	373 aa	Known RBP	12.36	□□□□□ -0.43
MED17-222	ENST00000640027	COL11A1	P12107	1806 aa	Predicted RBP	12.36	□□□□□ -0.43
MED17-222	ENST00000640027	LANCL1	O43813	399 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	EML2	O95834	649 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	ANKRD34C	P0C6C1	535 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	LPAR6	P43657	344 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	OXA1L	Q15070	435 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	PRICKLE4	Q2TBC4	344 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	GAB4	Q2WGN9	574 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	ETFRF1	Q6IPR1	90 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	NPEPL1	Q8NDH3	523 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	LURAP1	Q96LR2	239 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	SLC25A22	Q9H936	323 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	SAP30L	Q9HAJ7	183 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	NIT2	Q9NQR4	276 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	OR1A1	Q9P1Q5	309 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	SCN3A	Q9NY46	2000 aa		12.36	□□□□□ -0.43
MED17-222	ENST00000640027	CDX4	O14627	284 aa	Predicted RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	CTLA4	P16410	223 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	AMT	P48728	403 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	FOXO1	Q12778	655 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	ZNF547	Q8IVP9	402 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	SFTPA2	Q8IWL1	248 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	SFTPA1	Q8IWL2	248 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	C1RL	Q9NZP8	487 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027		A0A0A6YYJ9	748 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	ZNF716	A6NP11	495 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	PATE3	B3GLJ2	98 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	F2RL2	O00254	374 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	HOXB3	P14651	431 aa	Predicted RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	RAB5A	P20339	215 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	IGFBP7	Q16270	282 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	NHLRC1	Q6VVB1	395 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	ZNF485	Q8NCK3	441 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	NUBPL	Q8TB37	319 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	BDP1	A6H8Y1	2624 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027		A0A1B0GTQ1	180 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	PGA3	P0DJD8	388 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	FA2H	Q7L5A8	372 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	C6orf201	Q7Z4U5	140 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	OR52B4	Q8NGK2	314 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	OR6S1	Q8NH40	331 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	NEIL1	Q96FI4	390 aa	Predicted RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	UQCC2	Q9BRT2	126 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	WDR61	Q9GZS3	305 aa	Known RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	MS4A5	Q9H3V2	200 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	TMED3	Q9Y3Q3	217 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	NPTN	Q9Y639	398 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	TUBAL3	A6NHL2	446 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	PTHLH	P12272	177 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	HIST1H1D	P16402	221 aa	Known RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	PJVK	Q0ZLH3	352 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	TRAT1	Q6PIZ9	186 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	MRGPRE	Q86SM8	312 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	SLC6A13	Q9NSD5	602 aa		12.35	□□□□□ -0.43
MED17-222	ENST00000640027	LSM2	Q9Y333	95 aa	Known RBP	12.35	□□□□□ -0.43
MED17-222	ENST00000640027	HOXC4	P09017	264 aa	Predicted RBP	12.34	□□□□□ -0.43
MED17-222	ENST00000640027	SMIM18	P0DKX4	95 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	H3F3A	P84243	136 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	TMEM171	Q8WVE6	324 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	ALG14	Q96F25	216 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	TMUB1	Q9BVT8	246 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	NKX6-2	Q9C056	277 aa	Predicted RBP	12.34	□□□□□ -0.43
MED17-222	ENST00000640027	MPC1	Q9Y5U8	109 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	IGKV3-7	A0A075B6H7	116 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	FGF2	P09038	288 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	LGALS7	P47929	136 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	TMEM229B	Q8NBD8	167 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.34	□□□□□ -0.43
MED17-222	ENST00000640027	KCNE1B	A0A087WTH5	132 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	C21orf140	B9A014	251 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	PYCARD-AS1	I3L0S3	204 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	TBX19	O60806	448 aa		12.34	□□□□□ -0.43
MED17-222	ENST00000640027	TIPARP	Q7Z3E1	657 aa	Known RBP	12.34	□□□□□ -0.43
MED17-222	ENST00000640027	KIAA1217	Q5T5P2	1943 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms