RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 A0A0J9YW62 118 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 NUDT19A8MXV4 375 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 LINC01387J3KSC0 135 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 CST4P01036 141 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 CSF2RBP32927 897 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.38
SCARB2-216ENST00000639300 MIDNQ504T8 468 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 WFDC8Q8IUA0 241 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 FAM58AQ8N1B3 248 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 FBXL17Q9UF56 701 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 FAM24AA6NFZ4 105 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 LEUTXA8MZ59 168 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 MASP2O00187 686 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 CRHP06850 196 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 PLPPR5Q32ZL2 321 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 TMEM104Q8NE00 496 aa12.71□□□□□ -0.38
SCARB2-216ENST00000639300 LIN7CQ9NUP9 197 aaKnown RBP12.71□□□□□ -0.38
SCARB2-216ENST00000639300 PSME4Q14997 1843 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 PRRG2O14669 202 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 APOBEC4Q8WW27 367 aaKnown RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 UHRF2Q96PU4 802 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 PATZ1Q9HBE1 687 aaKnown RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 STRAPQ9Y3F4 350 aaKnown RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 PPP1R2P9O14990 202 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 CYB5BO43169 146 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 RAB5CP51148 216 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 CEBPEQ15744 281 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 BATFQ16520 125 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 LINC01590Q5TEZ4 76 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 PRSS54Q6PEW0 395 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 KISS1RQ969F8 398 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 GALMQ96C23 342 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 ADAM20O43506 726 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 GSK3AP49840 483 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 DCAF12L2Q5VW00 463 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 GPX7Q96SL4 187 aaPredicted RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 MRPL22Q9NWU5 206 aaKnown RBP12.7□□□□□ -0.38
SCARB2-216ENST00000639300 ZNF391Q9UJN7 358 aa12.7□□□□□ -0.38
SCARB2-216ENST00000639300 H7BYZ3 331 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 IFITM2Q01629 132 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 PJVKQ0ZLH3 352 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 MOGAT2Q3SYC2 334 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 NECAP1Q8NC96 275 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 RPS4Y2Q8TD47 263 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ERGIC1Q969X5 290 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ADIPOR1Q96A54 375 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 LINC00052Q96N35 136 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 HDHD3Q9BSH5 251 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ADAT1Q9BUB4 502 aaKnown RBP12.69□□□□□ -0.38
SCARB2-216ENST00000639300 KCNAB3O43448 404 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 TXNDC12O95881 172 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 NGFP01138 241 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ZNF787Q6DD87 383 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 OR10V1Q8NGI7 309 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 CLDN23Q96B33 292 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 NAA60Q9H7X0 242 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 KCNK7Q9Y2U2 307 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 TMED3Q9Y3Q3 217 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 RALGAPA2Q2PPJ7 1873 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 MDFIC2A0A1B0GVS7 189 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 LRRC30A6NM36 301 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ZP3P21754 424 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 MAGEA5P43359 124 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 TMEM33P57088 247 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 DHODHQ02127 395 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 HIST2H3AQ71DI3 136 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ZNF485Q8NCK3 441 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 ANGPTL6Q8NI99 470 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 DYRK2Q92630 601 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 RASL12Q9NYN1 266 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 TRAV39A0A0B4J263 110 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 IGHV3-13P01766 116 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 IGHV3-7P01780 117 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 LIFP15018 202 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
SCARB2-216ENST00000639300 POLR2GP62487 172 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCARB2-216ENST00000639300 TLE1Q04724 770 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 C4orf17Q53FE4 359 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 RBMXL3Q8N7X1 1067 aaKnown RBP12.69□□□□□ -0.38
SCARB2-216ENST00000639300 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
SCARB2-216ENST00000639300 DEFB108AA8MXU0 73 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 KLF4O43474 513 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 SPRY3O43610 288 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 GUK1Q16774 197 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 SLC25A42Q86VD7 318 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 DEFB124Q8NES8 71 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 OR5C1Q8NGR4 320 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 ADGRG7Q96K78 797 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 TECTBQ96PL2 329 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 FREM3P0C091 2139 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 RALGAPA1Q6GYQ0 2036 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 IGLV1-36A0A0B4J1U3 117 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 TRAV17A0A0B4J275 112 aa12.68□□□□□ -0.38
SCARB2-216ENST00000639300 CALCRP30988 508 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms